RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SLC36A2Q495M3 483 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 PABPC1L2AQ5JQF8 200 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 ELFN2Q5R3F8 820 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 ZNF774Q6NX45 483 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 KCTD18Q6PI47 426 aaPredicted RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 PAMR1Q6UXH9 720 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 LRRN1Q6UXK5 716 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 PLEKHG7Q6ZR37 379 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 KCTD8Q6ZWB6 473 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 BHLHA15Q7RTS1 189 aaPredicted RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 SLC16A14Q7RTX9 510 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 MDP1Q86V88 176 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 CATSPERDQ86XM0 798 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 LINC00346Q8IVM7 164 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 ODF3L1Q8IXM7 274 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 PRSS35Q8N3Z0 413 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 STX19Q8N4C7 294 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 OR10H4Q8NGA5 316 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 OR6N2Q8NGY6 317 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 OR2G2Q8NGZ5 317 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 OR1F12Q8NHA8 337 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 SPRYD4Q8WW59 207 aaPredicted RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 RGP1Q92546 391 aaPredicted RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 FCGR1BQ92637 280 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 RNASE6Q93091 150 aaKnown RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 S100PBPQ96BU1 408 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 SLAMF6Q96DU3 332 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 YIPF6Q96EC8 236 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 C4orf36Q96KX1 117 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 C4orf45Q96LM5 186 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 MGLLQ99685 303 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 DOK1Q99704 481 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 MND1Q9BWT6 205 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 HDHD2Q9H0R4 259 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 NIPAL2Q9H841 368 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 ELOVL3Q9HB03 270 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 NDUFB11Q9NX14 153 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 NPAP1Q9NZP6 1156 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 NUFIP1Q9UHK0 495 aaKnown RBP4.59□□□□□ -1.67
C9orf3-205ENST00000427193 ERGIC3Q9Y282 383 aa4.59□□□□□ -1.67
C9orf3-205ENST00000427193 WNK1Q9H4A3 2382 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TRBV5-5A0A0J9YX44 114 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 A0A0U1RQV5 110 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 LOC390937A0A1W2PQ73 354 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 DAPL1A0PJW8 107 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 FAM90A7PA6NKC0 464 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 FAM90A22PA8MWA6 464 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 FAM90A12PA8MX19 464 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 FAM90A23PA8MXZ1 464 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF670-ZNF695F2Z2N8 137 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 RAD51DO75771 328 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 FARS2O95363 451 aaKnown RBP4.58□□□□□ -1.68
C9orf3-205ENST00000427193 CLPTM1O96005 669 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TTRP02766 147 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 MYL12AP19105 171 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 GALP22466 123 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 WNT5AP41221 380 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 CRYBB2P43320 205 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 RGS6P49758 472 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 GRB2P62993 217 aaKnown RBP4.58□□□□□ -1.68
C9orf3-205ENST00000427193 MFGE8Q08431 387 aaPredicted RBP4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TNK1Q13470 666 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 EIF2B1Q14232 305 aaKnown RBP4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TSC22D1Q15714 1073 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 CTF1Q16619 201 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 GSG1Q2KHT4 349 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TP53I3Q53FA7 332 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 C9orf135Q5VTT2 229 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 ASPHD2Q6ICH7 369 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 RPL22L1Q6P5R6 122 aaKnown RBP4.58□□□□□ -1.68
C9orf3-205ENST00000427193 DRAM2Q6UX65 266 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 UNQ9370/PRO34162Q6UXP9 181 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TMEM91Q6ZNR0 172 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 LUZP2Q86TE4 346 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TMEM219Q86XT9 240 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 LYPD6Q86Y78 171 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 ELMOD2Q8IZ81 293 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 UBE2J2Q8N2K1 259 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 LRRC18Q8N456 261 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 STEAP2Q8NFT2 490 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 ITFG2Q969R8 447 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TMIGD2Q96BF3 282 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 SMIM19Q96E16 107 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 DACH2Q96NX9 599 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 TBX5Q99593 518 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 ATF6BQ99941 703 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 MROQ9BYG7 248 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 ACTR6Q9GZN1 396 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 CSTL1Q9H114 145 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 RERGLQ9H628 205 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 LAMP5Q9UJQ1 280 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 FBXL3Q9UKT7 428 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 AMDHD2Q9Y303 409 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 GRIP1Q9Y3R0 1128 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 R4GMQ9 66 aa4.58□□□□□ -1.68
C9orf3-205ENST00000427193 IGHV2OR16-5A0A0B4J2B6 119 aa4.57□□□□□ -1.68
C9orf3-205ENST00000427193 IGHV1-18A0A0C4DH31 117 aa4.57□□□□□ -1.68
C9orf3-205ENST00000427193 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms