RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
PTPN13-203ENST00000427191 ZGLP1P0C6A0 271 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
PTPN13-203ENST00000427191 EIF3IQ13347 325 aaKnown RBP12.91□□□□□ -0.34
PTPN13-203ENST00000427191 HIST3H3Q16695 136 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 UBALD2Q8IYN6 164 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 GABRG3Q99928 467 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 TMEM38BQ9NVV0 291 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 MMP17Q9ULZ9 603 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 AMDHD2Q9Y303 409 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 MELTFP08582 738 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 DEFB103AP81534 67 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 FOXO1Q12778 655 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 CD300LDQ6UXZ3 194 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 OR5M1Q8NGP8 315 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 ISG20L2Q9H9L3 353 aaKnown RBP12.91□□□□□ -0.34
PTPN13-203ENST00000427191 TBC1D29Q9UFV1 150 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 VAX2Q9UIW0 290 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 AKR7A2O43488 359 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 NGFP01138 241 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 FAAP20Q6NZ36 180 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 CYR61O00622 381 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 SNRPEP62304 92 aaKnown RBP12.91□□□□□ -0.34
PTPN13-203ENST00000427191 TMEM211Q6ICI0 200 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 RNF165Q6ZSG1 346 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 RNF167Q9H6Y7 350 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 B4GALT3O60512 393 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 PDCD6O75340 191 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 DLK1P80370 383 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 HLA-DRB5Q30154 266 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 ZNF750Q32MQ0 723 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 C12orf73Q69YU5 71 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 DICER1Q9UPY3 1922 aaKnown RBP12.91□□□□□ -0.34
PTPN13-203ENST00000427191 UPK1AO00322 258 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 ZNF77Q15935 545 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 TMEM251Q8N6I4 163 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 RAB1BQ9H0U4 201 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 SLC25A37Q9NYZ2 338 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 GLI4P10075 376 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 CACNG5Q9UF02 275 aa12.91□□□□□ -0.34
PTPN13-203ENST00000427191 A0A0A6YYD5 115 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 ZC3H12DA2A288 527 aaKnown RBP12.9□□□□□ -0.34
PTPN13-203ENST00000427191 M0R3E3 92 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 SMPD2O60906 423 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 CXorf1O96002 111 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 IL11RAQ14626 422 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 OR2A5Q96R48 311 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 ZNF141Q15928 474 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 MUC15Q8N387 334 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 ZBTB34Q8NCN2 500 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 OR5A2Q8NGI9 324 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 OR8D4Q8NGM9 314 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 DIRC2Q96SL1 478 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 NRSN2Q9GZP1 204 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 TMEM272A0A1B0GTI8 110 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 ZNF547Q8IVP9 402 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 FOXB1Q99853 325 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 B3GALT4O96024 378 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 KIR3DL2P43630 455 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 OR2Z1Q8NG97 314 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 MRGPRX3Q96LB0 322 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 SSX1Q16384 188 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 PAQR9Q6ZVX9 377 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
PTPN13-203ENST00000427191 A0A0B4J2E0 115 aa12.9□□□□□ -0.35
PTPN13-203ENST00000427191 A0A1B0GX12 115 aa12.9□□□□□ -0.35
PTPN13-203ENST00000427191 CTAG2O75638 210 aa12.9□□□□□ -0.35
PTPN13-203ENST00000427191 COL5A1-AS1Q5SY13 56 aa12.9□□□□□ -0.35
PTPN13-203ENST00000427191 FAM78BQ5VT40 261 aa12.9□□□□□ -0.35
PTPN13-203ENST00000427191 EID2BQ96D98 161 aa12.9□□□□□ -0.35
PTPN13-203ENST00000427191 EXOGQ9Y2C4 368 aaKnown RBP12.9□□□□□ -0.35
PTPN13-203ENST00000427191 OOEPA6NGQ2 149 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 C12orf54Q6X4T0 127 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 C1orf174Q8IYL3 243 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 LSMEM1Q8N8F7 131 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 CCL26Q9Y258 94 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 TRAV17A0A0B4J275 112 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 NFAM1Q8NET5 270 aaPredicted RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 TMPRSS13Q9BYE2 586 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 DEFB127Q9H1M4 99 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 PPIL1Q9Y3C6 166 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 SULT1A1P50225 295 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 C19orf57Q0VDD7 668 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 TMEM108Q6UXF1 575 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 D2HGDHQ8N465 521 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 RER1O15258 196 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 TBX19O60806 448 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 ACAA2P42765 397 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms