RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FZR1Q9UM11 496 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 SPEF1Q9Y4P9 236 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF736B4DX44 427 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 RAB3DO95716 219 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 CD74P04233 296 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ANOS1P23352 680 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ACKR3P25106 362 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 RPS27AP62979 156 aaKnown RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF92Q03936 586 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ZMYND11Q15326 602 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 MSMPQ1L6U9 139 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 MOGAT2Q3SYC2 334 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 SPATA46Q5T0L3 261 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 LCE2DQ5TA82 110 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ZBTB8BQ8NAP8 495 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 NUP37Q8NFH4 326 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 OR4C16Q8NGL9 310 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 OR2AE1Q8NHA4 323 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 BORCS8Q96FH0 119 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 LURAP1Q96LR2 239 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 SPACA5Q96QH8 159 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 DHRS9Q9BPW9 319 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 REPIN1Q9BWE0 567 aaKnown RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 TM2D1Q9BX74 207 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 SELENOIQ9C0D9 397 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 PDZD2O15018 2839 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 TMEM235A6NFC5 223 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 CYSRT1A8MQ03 144 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 SNRPGP15A8MWD9 76 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 DISC1C4P0D8 188 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 SMPD2O60906 423 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 CA11O75493 328 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 SOD3P08294 240 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 CPT2P23786 658 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 MPZP25189 248 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.28
SHOX2-202ENST00000425436 GLRXP35754 106 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 RAD52P43351 418 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 GUCA2AQ02747 115 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 SLC22A6Q4U2R8 563 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 ASCL4Q6XD76 172 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 OR51T1Q8NGJ9 327 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 OR1J1Q8NGS3 322 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 TMEM171Q8WVE6 324 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 GIMAP1Q8WWP7 306 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 MRPS24Q96EL2 167 aaKnown RBP13.33□□□□□ -0.28
SHOX2-202ENST00000425436 GAL3ST1Q99999 423 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 ALX4Q9H161 411 aaPredicted RBP13.33□□□□□ -0.28
SHOX2-202ENST00000425436 GPR173Q9NS66 373 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 NKIRAS2Q9NYR9 191 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 LAMP3Q9UQV4 416 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
SHOX2-202ENST00000425436 CD3DP04234 171 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 OR4A8P0C604 315 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 HIST1H1DP16402 221 aaKnown RBP13.32□□□□□ -0.28
SHOX2-202ENST00000425436 GNG2P59768 71 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 CD83Q01151 205 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 ADIPOQQ15848 244 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 ACTBL2Q562R1 376 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 TRAPPC6BQ86SZ2 158 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 TMEM104Q8NE00 496 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 PXT1Q8NFP0 134 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 POFUT1Q9H488 388 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
SHOX2-202ENST00000425436 IFT46Q9NQC8 304 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 STARD10Q9Y365 291 aa13.32□□□□□ -0.28
SHOX2-202ENST00000425436 SERPINE3A8MV23 424 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 ARPC1BO15143 372 aaKnown RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 CST4P01036 141 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 CSTBP04080 98 aaKnown RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 DANCRP0C864 163 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 TMEM225BP0DP42 221 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 MGMTP16455 207 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 ERP29P30040 261 aaKnown RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 SERPINF1P36955 418 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 ZP1P60852 638 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 PPP1CBP62140 327 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 TNK1Q13470 666 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 TMEM255AQ5JRV8 349 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 RGS7BPQ6MZT1 257 aaPredicted RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 MRPL21Q7Z2W9 205 aaKnown RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 NOXA1Q86UR1 476 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 FBXL14Q8N1E6 418 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 MUC15Q8N387 334 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 SLC25A40Q8TBP6 338 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 CCDC107Q8WV48 283 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 DACT3Q96B18 629 aaPredicted RBP13.31□□□□□ -0.28
SHOX2-202ENST00000425436 PRRT1Q99946 306 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 SYT3Q9BQG1 590 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 OR2J1Q9GZK6 312 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 SLC2A8Q9NY64 477 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 PTTG3PQ9NZH4 202 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
SHOX2-202ENST00000425436 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms