RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 OR2A4O95047 310 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 TXNDC12O95881 172 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PNPP00491 289 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SERPINA1P01009 418 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 APODP05090 189 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CD2P06729 351 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ERCC1P07992 297 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 GIPP09681 153 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DUX4L2P0CJ85 424 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DUX4L3P0CJ86 424 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DUX4L5P0CJ88 424 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DUX4L6P0CJ89 424 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DUX4L7P0CJ90 424 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 NCF1P14598 390 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 UGT2B7P16662 529 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF14P17017 642 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 RAB5AP20339 215 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 GZMHP20718 246 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CNR1P21554 472 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 NFYAP23511 347 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 S100A2P29034 98 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PTPN6P29350 595 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ADORA1P30542 326 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 S100A7P31151 101 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SDC4P31431 198 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SFNP31947 248 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ARR3P36575 388 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ACVR1BP36896 505 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CDKN2BP42772 138 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 RABIFP47224 123 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PITPNBP48739 271 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 MRPL19P49406 292 aaKnown RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DAPP51397 102 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF41P51814 821 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF140P52738 457 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 HCCSP53701 268 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CRISP1P54107 249 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 KLF3P57682 345 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 AP3S2P59780 193 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR2B8PP59922 312 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ERVS71-1P61550 626 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 BTG2P78543 158 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 MRPS10P82664 201 aaKnown RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 IRF8Q02556 426 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 EMX2Q04743 252 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 DPYSL3Q14195 570 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 JOSD1Q15040 202 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 KHDC3LQ587J8 217 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF311Q5JNZ3 666 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PRAMEF20Q5VT98 475 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 LRRC38Q5VT99 294 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PRAMEF8Q5VWM4 474 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PRAMEF7Q5VXH5 474 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 NCR3LG1Q68D85 454 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR6B2Q6IFH4 312 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 APOBEC3HQ6NTF7 200 aaKnown RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 FAHD2BQ6P2I3 314 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PODNL1Q6PEZ8 512 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CNIH2Q6PI25 160 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 LRRN1Q6UXK5 716 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 TMIGD1Q6UXZ0 262 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 WDR88Q6ZMY6 472 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 KCTD9Q7L273 389 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SSX6Q7RTT6 188 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR2W3Q7Z3T1 314 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 C6orf120Q7Z4R8 191 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SLC35E3Q7Z769 313 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF573Q86YE8 665 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZBTB8OSQ8IWT0 167 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 BAP18Q8IXM2 172 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SELENOHQ8IZQ5 122 aaKnown RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF664Q8N3J9 261 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 Q8N402 240 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 LRRC52Q8N7C0 313 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 FAM86B1Q8N7N1 296 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 HSD17B11Q8NBQ5 300 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ACBD4Q8NC06 268 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 GPR26Q8NDV2 337 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 FAM71CQ8NEG0 241 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM185AQ8NFB2 350 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR2M7Q8NG81 312 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR10D4PQ8NGN7 298 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR4A4PQ8NGN8 299 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR1S2Q8NGQ3 325 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR13C8Q8NGS7 320 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR10K1Q8NGX5 313 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 OR4L1Q8NH43 312 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 LKAAEAR1Q8TD35 194 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 TFGQ92734 400 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CORO2AQ92828 525 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 CDS1Q92903 461 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2ACQ93077 130 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 NEIL2Q969S2 332 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM203Q969S6 136 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 NT5C3BQ969T7 300 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 SLC25A46Q96AG3 418 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 LRRC58Q96CX6 371 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 C14orf79Q96F83 325 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 GALNT14Q96FL9 552 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms