RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ZNF418Q8TF45 676 aaPredicted RBP2.44□□□□□ -2.02
PMS1-209ENST00000424059 EEF1AKMT1Q8WVE0 214 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 NPIPB3Q92617 1050 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 IL22RA2Q969J5 263 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 IMP4Q96G21 291 aaKnown RBP2.44□□□□□ -2.02
PMS1-209ENST00000424059 BTF3L4Q96K17 158 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 CCDC115Q96NT0 180 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 MS4A10Q96PG2 267 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 SIGLEC12Q96PQ1 595 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 MIEN1Q9BRT3 115 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 PSMG3Q9BT73 122 aaPredicted RBP2.44□□□□□ -2.02
PMS1-209ENST00000424059 EFCAB11Q9BUY7 163 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 FAIM2Q9BWQ8 316 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 TMEM126AQ9H061 195 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 OR51J1Q9H342 316 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 RHOJQ9H4E5 214 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 C6orf106Q9H6K1 298 aaPredicted RBP2.44□□□□□ -2.02
PMS1-209ENST00000424059 FBXO6Q9NRD1 293 aaPredicted RBP2.44□□□□□ -2.02
PMS1-209ENST00000424059 MRPL16Q9NX20 251 aaKnown RBP2.44□□□□□ -2.02
PMS1-209ENST00000424059 MDFICQ9P1T7 246 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 NAT8BQ9UHF3 227 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 MUTYHQ9UIF7 546 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 KCNS2Q9ULS6 477 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 SLC7A7Q9UM01 511 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 DHDHQ9UQ10 334 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 TCF19Q9Y242 345 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 LAMTOR2Q9Y2Q5 125 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 TMED3Q9Y3Q3 217 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 UBIAD1Q9Y5Z9 338 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 LAMC3Q9Y6N6 1575 aa2.44□□□□□ -2.02
PMS1-209ENST00000424059 ROBO3Q96MS0 1386 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 EVPLQ92817 2033 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 NOTCH4Q99466 2003 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 SSH2Q76I76 1423 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 ARHGEF12Q9NZN5 1544 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 PLXNC1O60486 1568 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 IQGAP2Q13576 1575 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 TRAV38-1A0A0B4J264 116 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 PNMA8CA0A1B0GUJ8 204 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 ATP6AP2A0A1C7CYW4 349 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 TMEM189A5PLL7 270 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 CASTOR2A6NHX0 329 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 USP17L23D6RBM5 183 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 NPIPB11E5RHQ5 1161 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 F5H5K5 113 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 J3QR06 171 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 HMGB3O15347 200 aaKnown RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 RGS16O15492 202 aaPredicted RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 FABP7O15540 132 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 SPRY3O43610 288 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 GALR3O60755 368 aaPredicted RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 ALOX12BO75342 701 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 GCM2O75603 506 aaPredicted RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 NDUFA7O95182 113 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 CLIC3O95833 236 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 NRASP01111 189 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 HBZP02008 142 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR5AC1P0C628 307 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 HOXB9P17482 250 aaPredicted RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 RAB5AP20339 215 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 PRTN3P24158 256 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 HTR1DP28221 377 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 SHC1P29353 583 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 CMPK1P30085 196 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 HOXD3P31249 432 aaPredicted RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 GLRXP35754 106 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 TFPI2P48307 235 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 AQP5P55064 265 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 DSCR9P59020 149 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 TAS2R50P59544 299 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 TIMM10P62072 90 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 HIST1H1AQ02539 215 aaPredicted RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 MFAP5Q13361 173 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 FZD2Q14332 565 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR8B8Q15620 311 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 CTU2Q2VPK5 515 aaKnown RBP2.43□□□□□ -2.02
PMS1-209ENST00000424059 VWA2Q5GFL6 755 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 LYPLAL1Q5VWZ2 237 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 TMEM215Q68D42 235 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 ZNF343Q6P1L6 599 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 GJB7Q6PEY0 223 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 CD164L2Q6UWJ8 174 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 ALKAL2Q6UX46 152 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 MOB3CQ70IA8 216 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 NEGR1Q7Z3B1 354 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 RNF144BQ7Z419 303 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 PNKDQ8N490 385 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 EID2Q8N6I1 236 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 KIR3DL3Q8N743 410 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 ZNF485Q8NCK3 441 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 PLPP5Q8NEB5 264 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR4F6Q8NGB9 312 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR5AU1Q8NGC0 362 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR4N2Q8NGD1 307 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR4K5Q8NGD3 323 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR13J1Q8NGT2 312 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR5W2Q8NH69 310 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 OR5K2Q8NHB8 316 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 ZNRF2Q8NHG8 242 aa2.43□□□□□ -2.02
PMS1-209ENST00000424059 GPR148Q8TDV2 347 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms