RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DLGAP1O14490 977 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 DHRS3O75911 302 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 HSD17B1P14061 328 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 ARHGDIBP52566 201 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 IL24Q13007 206 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 CLVS2Q5SYC1 327 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 RTN4RL2Q86UN3 420 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 ABHD12Q8N2K0 398 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 PKIBQ9C010 78 aa13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
CHCHD3-202ENST00000423635 TMEM82A0PJX8 343 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 LEUTXA8MZ59 168 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 MMP23AO75900 390 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 IGLV1-47P01700 117 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 C9orf152Q5JTZ5 239 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 PLBD1Q6P4A8 553 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 CD300LDQ6UXZ3 194 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 COMMD2Q86X83 199 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 ZNF596Q8TC21 504 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 CHPT1Q8WUD6 406 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 CMTM5Q96DZ9 223 aa13.23□□□□□ -0.29
CHCHD3-202ENST00000423635 PSMD9O00233 223 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 OR3A4PP47883 348 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 MICAQ29983 383 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 OR52W1Q6IF63 320 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 KCTD18Q6PI47 426 aaPredicted RBP13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 ANGPTL5Q86XS5 388 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 Q8NFD4 153 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 PRR25Q96S07 402 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 GPR173Q9NS66 373 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 TAS2R1Q9NYW7 299 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 LAMP5Q9UJQ1 280 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
CHCHD3-202ENST00000423635 NUDT19A8MXV4 375 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 PRR23D1E9PI22 279 aaPredicted RBP13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 F8VVB4 439 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 F8VWA3 439 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 ARPC2O15144 300 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 PRODHO43272 600 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 PRR23D2P0DMB1 279 aaPredicted RBP13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 MAGEA2P43356 314 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 HCCSP53701 268 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 PPP1R8Q12972 351 aaKnown RBP13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 EDDM3AQ14507 147 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 COMMD1Q8N668 190 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 IQCF1Q8N6M8 205 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 TPRX1Q8N7U7 411 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 OR52N4Q8NGI2 321 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 CREB3L1Q96BA8 519 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 MROQ9BYG7 248 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 MTCH1Q9NZJ7 389 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 NUFIP1Q9UHK0 495 aaKnown RBP13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 UBE2J1Q9Y385 318 aaPredicted RBP13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 V9GYS6 101 aa13.21□□□□□ -0.29
CHCHD3-202ENST00000423635 FAM90A18PA6NE21 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 ARRDC5A6NEK1 342 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A16PA6NEW6 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A20PA6NIJ5 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A9PA6NNJ1 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A12PA8MX19 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A5PA8MXJ8 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 LY6LH3BQJ8 138 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 ZNF254O75437 659 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 TTRP02766 147 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A15PP0C7V4 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A13PP0C7W8 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A14PP0C7W9 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM90A24PP0C7X0 464 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 PEX2P28328 305 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 ERP29P30040 261 aaKnown RBP13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 ROM1Q03395 351 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 SNAPC1Q16533 368 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 SLC35D3Q5M8T2 416 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 C9orf66Q5T8R8 295 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 BAIAP2L2Q6UXY1 529 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 Q6ZSR3 168 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 HDXQ7Z353 690 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 THNSL2Q86YJ6 484 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 TEX47Q8TBZ9 253 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 RAX2Q96IS3 184 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 YIPF3Q9GZM5 350 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 GAR1Q9NY12 217 aaKnown RBP13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 SCOCQ9UIL1 159 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 HSPE1-MOB4S4R3N1 261 aa13.2□□□□□ -0.3
CHCHD3-202ENST00000423635 BUB1B-PAK6H3BSN5 160 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 CCL24O00175 119 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 E2F6O75461 281 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 SNRNP70P08621 437 aaKnown RBP13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 LYL1P12980 280 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 CD34P28906 385 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 PRDX6P30041 224 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 CEACAM3P40198 252 aa13.19□□□□□ -0.3
CHCHD3-202ENST00000423635 LUMP51884 338 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms