RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 C9orf172C9J069 976 aa9.99□□□□□ -0.81
PTCH1-205ENST00000418258 KLK8O60259 260 aa9.99□□□□□ -0.81
PTCH1-205ENST00000418258 WDR74Q6RFH5 385 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-205ENST00000418258 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
PTCH1-205ENST00000418258 THADAQ6YHU6 1953 aa9.99□□□□□ -0.81
PTCH1-205ENST00000418258 HMX2A2RU54 273 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 J3KRW8 73 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 AKR7A2O43488 359 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 MMP7P09237 267 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-205ENST00000418258 FOXO1Q12778 655 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 ZNF528Q3MIS6 628 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 C2CD4CQ8TF44 421 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 PRDM7Q9NQW5 492 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 KLK11Q9UBX7 282 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 LAMB2P55268 1798 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 A0A1W2PPQ1 181 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 C21orf140B9A014 251 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 RPL34P49207 117 aaKnown RBP9.98□□□□□ -0.81
PTCH1-205ENST00000418258 NXPH1P58417 271 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 OR2B8PP59922 312 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TMEM128Q5BJH2 165 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TMEM171Q8WVE6 324 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 ZDHHC11Q9H8X9 412 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TRAV1-2A0A0B4J238 106 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 WNT1P04628 370 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 UQCC2Q9BRT2 126 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 ABCA7Q8IZY2 2146 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TFAP2AP05549 437 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TMEM229BQ8NBD8 167 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 GLI3P10071 1580 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 SEMA7AO75326 666 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 JUNBP17275 347 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-205ENST00000418258 PAFAH1B2P68402 229 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 TOX3O15405 576 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-205ENST00000418258 ACTL6AO96019 429 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 GYPAP02724 150 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 PATE4P0C8F1 98 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 LPAR6P43657 344 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 LSM11P83369 360 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTCH1-205ENST00000418258 SSBP1Q04837 148 aaKnown RBP9.98□□□□□ -0.81
PTCH1-205ENST00000418258 SLC25A35Q3KQZ1 300 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 KCNJ3P48549 501 aa9.98□□□□□ -0.81
PTCH1-205ENST00000418258 DOCK6Q96HP0 2047 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 LANCL1O43813 399 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 TRAPPC2P0DI81 140 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 TRAPPC2BP0DI82 140 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 CD200P41217 278 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 GNG4P50150 75 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 CXorf58Q96LI9 332 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 C12orf10Q9HB07 376 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 APELAP0DMC3 54 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 CPN1P15169 458 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 GABRB1P18505 474 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 EVX1P49640 407 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 HTRA4P83105 476 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-205ENST00000418258 UBR3Q6ZT12 1888 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 UQCC1Q9NVA1 299 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 PLPP3O14495 311 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 DNPH1O43598 174 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 CD82P27701 267 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 PJVKQ0ZLH3 352 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 NTN4Q9HB63 628 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 IGHV5-10-1A0A0J9YXX1 117 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 MASP2O00187 686 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 EML2O95834 649 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 HOXC4P09017 264 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-205ENST00000418258 NKG7Q16617 165 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 C1RLQ9NZP8 487 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 INSIG2Q9Y5U4 225 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 A0A0B4J2E0 115 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 A0A1B0GX12 115 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 GATCO43716 136 aaKnown RBP9.97□□□□□ -0.81
PTCH1-205ENST00000418258 CCL4P13236 92 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 GP2P55259 537 aaKnown RBP9.97□□□□□ -0.81
PTCH1-205ENST00000418258 ASAH1Q13510 395 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 KIF26BQ2KJY2 2108 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 MS4A7Q9GZW8 240 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-205ENST00000418258 SKP2Q13309 424 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 TIGD3Q6B0B8 471 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 CLEC2AQ6UVW9 174 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 LINC00052Q96N35 136 aa9.97□□□□□ -0.81
PTCH1-205ENST00000418258 SLC17A2O00624 439 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 CD37P11049 281 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 NAAAQ02083 359 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 C6orf201Q7Z4U5 140 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 OR1L1Q8NH94 360 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 C19orf43Q9BQ61 176 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 SPINK4O60575 86 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 ARG1P05089 322 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 PRF1P14222 555 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 C19orf35Q6ZS72 473 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 OR2Y1Q8NGV0 311 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 SIRT3Q9NTG7 399 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-205ENST00000418258 TMEM272A0A1B0GTI8 110 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 GNG7O60262 68 aa9.96□□□□□ -0.81
PTCH1-205ENST00000418258 CISD3P0C7P0 127 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms