RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
RPS28-201ENST00000417088 PRSS22Q9GZN4 317 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 WNT10AQ9GZT5 417 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 ABCB10Q9NRK6 738 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 CLN6Q9NWW5 311 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 MTCH1Q9NZJ7 389 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 PITPNC1Q9UKF7 332 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.94□□□□□ -0.5
RPS28-201ENST00000417088 SNX5Q9Y5X3 404 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 DNAH3Q8TD57 4116 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 IGKV1-27A0A075B6S5 117 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 FAM230AA0A1W2PPH8 454 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 DYNLT3P51808 116 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 Q6ZS46 218 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 GDPD3Q7L5L3 318 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 TCEANCQ8N8B7 351 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 CEP19Q96LK0 163 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
RPS28-201ENST00000417088 PRRG3Q9BZD7 231 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 H2AFY2Q9P0M6 372 aaPredicted RBP11.93□□□□□ -0.5
RPS28-201ENST00000417088 ZNF281Q9Y2X9 895 aa11.93□□□□□ -0.5
RPS28-201ENST00000417088 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 MITFO75030 526 aaPredicted RBP11.92□□□□□ -0.5
RPS28-201ENST00000417088 JUNBP17275 347 aaPredicted RBP11.92□□□□□ -0.5
RPS28-201ENST00000417088 EPHA2P29317 976 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 OR12D2P58182 307 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 BLCAPP62952 87 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 MEF2CQ06413 473 aaPredicted RBP11.92□□□□□ -0.5
RPS28-201ENST00000417088 DYNC1I2Q13409 638 aaKnown RBP11.92□□□□□ -0.5
RPS28-201ENST00000417088 ODF4Q2M2E3 257 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 SLX4IPQ5VYV7 408 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 SSX6Q7RTT6 188 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 OR8H2Q8N162 312 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 OR4F17Q8NGA8 305 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 TMEM163Q8TC26 289 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
RPS28-201ENST00000417088 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 SNX22Q96L94 193 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 OR4F4Q96R69 305 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 OR5M11Q96RB7 305 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 SLC7A11Q9UPY5 501 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 POMPQ9Y244 141 aa11.92□□□□□ -0.5
RPS28-201ENST00000417088 DSCAML1Q8TD84 2053 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 ZAR1LA6NP61 321 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 H3BSH0 61 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 INMTO95050 263 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 RPP14O95059 124 aaKnown RBP11.91□□□□□ -0.5
RPS28-201ENST00000417088 ACTA2P62736 377 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 ACTG2P63267 376 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 ACTC1P68032 377 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 ACTA1P68133 377 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 C12orf73Q69YU5 71 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 CATSPERDQ86XM0 798 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 EGFL6Q8IUX8 553 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 YIPF7Q8N8F6 280 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 SGCDQ92629 289 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 ZNF714Q96N38 554 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 IL4I1Q96RQ9 567 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 TBX5Q99593 518 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 NECAP2Q9NVZ3 263 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 HILPDAQ9Y5L2 63 aa11.91□□□□□ -0.5
RPS28-201ENST00000417088 hADV38S2A0JD32 116 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 F2RL2O00254 374 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 GYG2O15488 501 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 SYT7O43581 403 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 ALX3O95076 343 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 IGHA1P01876 353 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 KRT8P05787 483 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 FUT6P51993 359 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 LOXL3P58215 753 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 EDDM3AQ14507 147 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 TMEM95Q3KNT9 176 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 DNAL1Q4LDG9 190 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 SLC25A26Q70HW3 274 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 TPRX1Q8N7U7 411 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 OR52N4Q8NGI2 321 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 PHF21AQ96BD5 680 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 PLEKHA1Q9HB21 404 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
RPS28-201ENST00000417088 KRT84Q9NSB2 600 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
RPS28-201ENST00000417088 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.5
RPS28-201ENST00000417088 IGHV2-26A0A0B4J1V2 119 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
RPS28-201ENST00000417088 METTL15A6NJ78 407 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 FAM90A22PA8MWA6 464 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 PEX14O75381 377 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 HAND1O96004 215 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 VDAC2P45880 294 aaPredicted RBP11.89□□□□□ -0.51
RPS28-201ENST00000417088 SLC34A1Q06495 639 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
RPS28-201ENST00000417088 GID4Q8IVV7 300 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 ZNF676Q8N7Q3 588 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 EMG1Q92979 244 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms