RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PNLIPP16233 465 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC37A1P57057 533 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 TAS2R46P59540 309 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 PHLDA2Q53GA4 152 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 MRPL41Q8IXM3 137 aaKnown RBP12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC26A10Q8NG04 563 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 KCNG3Q8TAE7 436 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM208Q9BTX3 173 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 IGKV1D-8A0A087WSZ0 117 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM24AA6NFZ4 105 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 HLA-DOBP13765 273 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 PIGPP57054 158 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 ICAM4Q14773 271 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 NCR3LG1Q68D85 454 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 ZNF440Q8IYI8 595 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC22A18Q96BI1 424 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 ADOQ96SZ5 270 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 KIR3DX1Q9H7L2 352 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 MMP17Q9ULZ9 603 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 XKRY2A2RUG3 117 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 B4DGG1 531 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 ISG15P05161 165 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR5AC1P0C628 307 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 RAB4AP20338 218 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 CEACAM6P40199 344 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 BATFQ16520 125 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 SPSB3Q6PJ21 355 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 OGFOD3Q6PK18 319 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR10J5Q8NHC4 309 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 LIPHQ8WWY8 451 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 DGAT2Q96PD7 388 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR10A5Q9H207 317 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 PADI1Q9ULC6 663 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 CLDN34H7C241 214 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 IFNL4K9M1U5 179 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 MRPS21P82921 87 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 H3F3AP84243 136 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 RUNX1Q01196 453 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 PAX5Q02548 391 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 ABCA11PQ4W5N1 156 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 ABHD12BQ7Z5M8 362 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM217Q8N7C4 229 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 SHDQ96IW2 340 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 HDHD3Q9BSH5 251 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 URM1Q9BTM9 101 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR10A2Q9H208 303 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 SRPK3Q9UPE1 567 aa12.9□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM230AA0A1W2PPH8 454 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 ZFP92A6NM28 416 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 SCGB1D1O95968 90 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 IGHV4-34P06331 123 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 AKT2P31751 481 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 COL10A1Q03692 680 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 ZNF117Q03924 483 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 PMS2P11Q13670 270 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 OR1P1Q8NH06 330 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 CHD3Q12873 2000 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 PCNX3Q9H6A9 2034 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 ONECUT2O95948 504 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 CTSEP14091 401 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 FOXK1P85037 733 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 FAM185AQ8N0U4 392 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 LANCL2Q9NS86 450 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 KIAA1456Q9P272 454 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 NXT1Q9UKK6 140 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 SDK2Q58EX2 2172 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 ST8SIA3O43173 380 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 MMP16P51512 607 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 GNMTQ14749 295 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 P2RY6Q15077 328 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 STT3BQ8TCJ2 826 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 HIST1H2AAQ96QV6 131 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 RTN4RQ9BZR6 473 aa12.89□□□□□ -0.35
NCKIPSD-204ENST00000416649 DHRS7CA6NNS2 312 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 DLEU1O43261 78 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 NXPH3O95157 252 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 FOLR1P15328 257 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 GNG10P50151 68 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 NOVA1P51513 510 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 TLE1Q04724 770 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 TEX38Q6PEX7 206 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 TXNIPQ9H3M7 391 aa12.88□□□□□ -0.35
NCKIPSD-204ENST00000416649 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms