RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TLE4Q04727 773 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
SGCE-202ENST00000415788 CLVS2Q5SYC1 327 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 LIPNQ5VXI9 398 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 FAAP20Q6NZ36 180 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 ZNF101Q8IZC7 436 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 OR4C16Q8NGL9 310 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 ST8SIA2Q92186 375 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 PHYHIPLQ96FC7 376 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 WDR89Q96FK6 387 aaPredicted RBP12.46□□□□□ -0.41
SGCE-202ENST00000415788 NKX6-2Q9C056 277 aaPredicted RBP12.46□□□□□ -0.41
SGCE-202ENST00000415788 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.41
SGCE-202ENST00000415788 TMEM269A0A1B0GVZ9 245 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 TEX46H3BTG2 121 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 LCATP04180 440 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 RLN1P04808 185 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 CFPP27918 469 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 ZNF121P58317 390 aaPredicted RBP12.46□□□□□ -0.42
SGCE-202ENST00000415788 ZNF345Q14585 488 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 ATRAIDQ6UW56 229 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 MOB3CQ70IA8 216 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 MUC20Q8N307 709 aaPredicted RBP12.46□□□□□ -0.42
SGCE-202ENST00000415788 OR10K1Q8NGX5 313 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 THRSPQ92748 146 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 R4GMQ9 66 aa12.46□□□□□ -0.42
SGCE-202ENST00000415788 TRBV5-5A0A0J9YX44 114 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 H3BUI4 141 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 ZFPL1O95159 310 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 SPDEFO95238 335 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 SIX6O95475 246 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 PLAUP00749 431 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 ANXA2P07355 339 aaKnown RBP12.45□□□□□ -0.42
SGCE-202ENST00000415788 CLDN12P56749 244 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 PPP1CBP62140 327 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 S100A12P80511 92 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 MALLQ13021 153 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 C11orf88Q6PI97 169 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 C17orf107Q6ZR85 190 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 ZNF295-AS1Q8N0V1 137 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 OR1J1Q8NGS3 322 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 RGP1Q92546 391 aaPredicted RBP12.45□□□□□ -0.42
SGCE-202ENST00000415788 MYOZ1Q9NP98 299 aaPredicted RBP12.45□□□□□ -0.42
SGCE-202ENST00000415788 TMEM138Q9NPI0 162 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 FAM206AQ9NX38 181 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 DOPEY2Q9Y3R5 2298 aa12.45□□□□□ -0.42
SGCE-202ENST00000415788 PRR14LQ5THK1 2151 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 H7C2Y5 167 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 PLATP00750 562 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 NGFP01138 241 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 CD8AP01732 235 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 RLN2P04090 185 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 FCER2P06734 321 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 SRSF4Q08170 494 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 C2orf68Q2NKX9 166 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 LRRTM1Q86UE6 522 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 OR10A2Q9H208 303 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 RGCCQ9H4X1 137 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 OPA3Q9H6K4 179 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 TAS2R3Q9NYW6 316 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 CISD1Q9NZ45 108 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 STEAP1Q9UHE8 339 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 ZNF391Q9UJN7 358 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 KANTRA0A1W2PQU2 76 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 HS3ST1O14792 307 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 XRCC2O43543 280 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 SRSF10O75494 262 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 OR2F2O95006 317 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 RPP14O95059 124 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 CBX5P45973 191 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 NANOS3P60323 173 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 DEFA5Q01523 94 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 OR2F1Q13607 317 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 ALKBH1Q13686 389 aaKnown RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 DCAF12L2Q5VW00 463 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 FAM57BQ71RH2 274 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 NAA40Q86UY6 237 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 TMEM200AQ86VY9 491 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 KCNRGQ8N5I3 272 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 OR5AK2Q8NH90 309 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 LILRB1Q8NHL6 650 aaPredicted RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 TMEM171Q8WVE6 324 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 PGAM5Q96HS1 289 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 OR51B6Q9H340 312 aa12.44□□□□□ -0.42
SGCE-202ENST00000415788 BARX1Q9HBU1 254 aaPredicted RBP12.44□□□□□ -0.42
SGCE-202ENST00000415788 RAB19A4D1S5 217 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 GGT3PA6NGU5 568 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 E7EQL1 145 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 SULT1C2O00338 296 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 SLC2A1P11166 492 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 SLC25A4P12235 298 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
SGCE-202ENST00000415788 THBS4P35443 961 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 SNAI3Q3KNW1 292 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 ZNF718Q3SXZ3 478 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
SGCE-202ENST00000415788 FDX2Q6P4F2 183 aa12.43□□□□□ -0.42
SGCE-202ENST00000415788 ZNF546Q86UE3 836 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms