RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CNN3Q15417 329 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 SP6Q3SY56 376 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 MIDNQ504T8 468 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 PHYHD1Q5SRE7 291 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 FAM24BQ8N5W8 94 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 PIGTQ969N2 578 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NTNG2Q96CW9 530 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 POM121Q96HA1 1249 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 GINS3Q9BRX5 216 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NAA60Q9H7X0 242 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 MIOXQ9UGB7 285 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 FOXD3Q9UJU5 478 aaPredicted RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 TINAGQ9UJW2 476 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 RCL1Q9Y2P8 373 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 FREM2Q5SZK8 3169 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 RALGAPA1Q6GYQ0 2036 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 CEP192Q8TEP8 1941 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 LOC102723996A0A087X1L8 192 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 H7C1Q1 480 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NDUFS6O75380 124 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 TSPAN15O95858 294 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 SCGB1D2O95969 90 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 CD63P08962 238 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 ZNF728P0DKX0 622 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 PMELP40967 661 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 P2RY1P47900 373 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NOVA1P51513 510 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 DSCR4P56555 118 aaPredicted RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 PRSS12P56730 875 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 PIGPP57054 158 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 IL13RA2Q14627 380 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 RSU1Q15404 277 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 TSC22D1Q15714 1073 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NCMAPQ5T1S8 102 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 MRPL14Q6P1L8 145 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 SLC39A7Q92504 469 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 C18orf12Q96KH6 178 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 SYT3Q9BQG1 590 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 DUSP23Q9BVJ7 150 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 PHF7Q9BWX1 381 aaPredicted RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 WDR54Q9H977 334 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 SPACA1Q9HBV2 294 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 ZNF391Q9UJN7 358 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 CA14Q9ULX7 337 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 STRAPQ9Y3F4 350 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 EML6Q6ZMW3 1958 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 ZNF850A8MQ14 1090 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 XRCC2O43543 280 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 MBPP02686 304 aaPredicted RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 RAB35Q15286 201 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 TSPO2Q5TGU0 170 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 LHFPL2Q6ZUX7 228 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 C20orf196Q8IYI0 205 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 MAML2Q8IZL2 1156 aaPredicted RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 LRRC18Q8N456 261 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 REEP6Q96HR9 211 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 FAAP24Q9BTP7 215 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 SF3B5Q9BWJ5 86 aaKnown RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 RBM24Q9BX46 236 aaKnown RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 PLEK2Q9NYT0 353 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 IL36GQ9NZH8 169 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 LUZP4Q9P127 313 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 AK3Q9UIJ7 227 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 NXT1Q9UKK6 140 aaKnown RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 FRYLO94915 3013 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 DMDP11532 3685 aa8.52□□□□□ -1.05
CD44-206ENST00000415148 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
CD44-206ENST00000415148 M0R036 132 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 DNPH1O43598 174 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 DIRAS3O95661 229 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 IGHV2-5P01817 119 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 MT-ND4LP03901 98 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 CRYGSP22914 178 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 CHATP28329 748 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 DUSP1P28562 367 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 RBP2P50120 134 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ABCA11PQ4W5N1 156 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ADAM5Q6NVV9 412 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 LURAP1LQ8IV03 231 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 LGI3Q8N145 548 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ZNF561Q8N587 486 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 AKR7LQ8NHP1 331 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 RTN4IP1Q8WWV3 396 aaPredicted RBP8.51□□□□□ -1.05
CD44-206ENST00000415148 DYRK2Q92630 601 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 GNRHR2Q96P88 292 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 ZNF385AQ96PM9 386 aaKnown RBP8.51□□□□□ -1.05
CD44-206ENST00000415148 ZNF251Q9BRH9 671 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 SMDT1Q9H4I9 107 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 SHANK1Q9Y566 2161 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 SPAG17Q6Q759 2223 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 IGHV5-10-1A0A0J9YXX1 117 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 A0A1B0GW64 132 aa8.51□□□□□ -1.05
CD44-206ENST00000415148 S100A6P06703 90 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms