RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DGUOKQ16854 277 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 Q499Y3 187 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 DMKNQ6E0U4 476 aaPredicted RBP12.18□□□□□ -0.46
CHD1-202ENST00000414220 LAIR2Q6ISS4 152 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 USP43Q70EL4 1123 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 SATL1Q86VE3 508 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 SAXO1Q8IYX7 474 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 ZNRF1Q8ND25 227 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 OR5D13Q8NGL4 314 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 DACT3Q96B18 629 aaPredicted RBP12.18□□□□□ -0.46
CHD1-202ENST00000414220 CNBD2Q96M20 576 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 WDFY2Q96P53 400 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 S100A13Q99584 98 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 CDCA4Q9BXL8 241 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 FAM234AQ9H0X4 552 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 ONECUT1Q9UBC0 465 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 ZNF222Q9UK12 451 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 NAV3Q8IVL0 2385 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 hCG_1809904A0A1W2PP81 198 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 A0A1W2PPE2 198 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 A0A1W2PR64 198 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 A0A1W2PRV1 198 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 RNF212BA8MTL3 300 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 RGS10O43665 173 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 ALDOBP05062 364 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 CELP19835 753 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 AMY2BP19961 511 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
CHD1-202ENST00000414220 KISS1Q15726 138 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 RBM48Q5RL73 367 aaKnown RBP12.17□□□□□ -0.46
CHD1-202ENST00000414220 XAF1Q6GPH4 301 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 FAM58AQ8N1B3 248 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 BATF2Q8N1L9 274 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 MS4A15Q8N5U1 240 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 KIR3DL3Q8N743 410 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 ASCC1Q8N9N2 400 aaKnown RBP12.17□□□□□ -0.46
CHD1-202ENST00000414220 LY6G5BQ8NDX9 201 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 RPS4Y2Q8TD47 263 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 CCDC90BQ9GZT6 254 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 TMEM138Q9NPI0 162 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 PCDHB16Q9NRJ7 776 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 MAB21L2Q9Y586 359 aa12.17□□□□□ -0.46
CHD1-202ENST00000414220 JMJD1CQ15652 2540 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 TRAV40A0A0B4J280 105 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 A0A1B0GW55 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SH2D1BO14796 132 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SPRY1O43609 319 aaPredicted RBP12.16□□□□□ -0.46
CHD1-202ENST00000414220 FSHBP01225 129 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L2P0CJ85 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 PRKACAP17612 351 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SLC35A2P78381 396 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 ACSM1Q08AH1 577 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SPHARQ15513 63 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 MED22Q15528 200 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SPIN3Q5JUX0 258 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
CHD1-202ENST00000414220 CD177Q8N6Q3 437 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 ZNF485Q8NCK3 441 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 C8orf46Q8TAG6 207 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 RFT1Q96AA3 541 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
CHD1-202ENST00000414220 ELL3Q9HB65 397 aaPredicted RBP12.16□□□□□ -0.46
CHD1-202ENST00000414220 TAS2R4Q9NYW5 299 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 DUX4Q9UBX2 424 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 ANK3Q12955 4377 aaKnown RBP12.16□□□□□ -0.46
CHD1-202ENST00000414220 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
CHD1-202ENST00000414220 PNMA8CA0A1B0GUJ8 204 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 TRIM77I1YAP6 450 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 KDM4BO94953 1096 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 LALBAP00709 142 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 TK1P04183 234 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 SELLP14151 372 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 BCL3P20749 454 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 EEF1B2P24534 225 aaKnown RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 BDKRB2P30411 391 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 RPL31P62899 125 aaKnown RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 COL10A1Q03692 680 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 C1orf122Q6ZSJ8 110 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 GDPD3Q7L5L3 318 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 FAM185AQ8N0U4 392 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 ZFP41Q8N8Y5 198 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 OR5D18Q8NGL1 313 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 SNX22Q96L94 193 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 ZNF184Q99676 751 aaPredicted RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 FAM192AQ9GZU8 254 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 DUSP21Q9H596 190 aa12.15□□□□□ -0.46
CHD1-202ENST00000414220 EXOSC4Q9NPD3 245 aaKnown RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 PAK1IP1Q9NWT1 392 aaPredicted RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 SIRT4Q9Y6E7 314 aaPredicted RBP12.15□□□□□ -0.46
CHD1-202ENST00000414220 DOCK11Q5JSL3 2073 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 TRBV5-5A0A0J9YX44 114 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms