RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MCUR1Q96AQ8 359 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CREB3L1Q96BA8 519 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CMTM5Q96DZ9 223 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 WDR34Q96EX3 536 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 DCUN1D1Q96GG9 259 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 COX14Q96I36 57 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCDC115Q96NT0 180 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF717Q9BY31 904 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 AICDAQ9GZX7 198 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR52A5Q9H2C5 316 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRSS16Q9NQE7 514 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 UBAP1Q9NZ09 502 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCDC167Q9P0B6 97 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 VAPAQ9P0L0 249 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF629Q9UEG4 869 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSMD13Q9UNM6 376 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 RNF11Q9Y3C5 154 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 FADS3Q9Y5Q0 445 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 SCN2AQ99250 2005 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NACAE9PAV3 2078 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 MYO10Q9HD67 2058 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 TNRC18O15417 2968 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGKV1-8A0A0C4DH67 115 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGHV5-10-1A0A0J9YXX1 117 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 A0A1W2PP18 115 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 A0A1W2PQ67 120 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 CIB4A0PJX0 185 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 TRIM64CA6NLI5 447 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR2AG2A6NM03 316 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SYCE1LA8MT33 242 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 VGLL3A8MV65 326 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 LOC730098B7Z3J9 87 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 E5RI56 91 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 K7EQS6 105 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC9A3R1O14745 358 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 LIN7AO14910 233 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ACOX3O15254 700 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GCM2O75603 506 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 RP2O75695 350 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 OTCP00480 354 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 PDYNP01213 254 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SERPIND1P05546 499 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 C8GP07360 202 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GNAO1P09471 354 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGHV1-8P0DP01 117 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 THRAP10827 490 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRPS2P11908 318 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 IDO1P14902 403 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF43P17038 809 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GGT1P19440 569 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ME2P23368 584 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 PEBP1P30086 187 aaKnown RBP2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 P2RY2P41231 377 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 CDKN1BP46527 198 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SSR4P51571 173 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 MTPNP58546 118 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 NAA20P61599 178 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 TBPL1P62380 186 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ESRRGP62508 458 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 EMX2Q04743 252 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ERCC8Q13216 396 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 HTR4Q13639 388 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 FLOT2Q14254 428 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 CLINT1Q14677 625 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 IRF4Q15306 451 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 MAPRE2Q15555 327 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 VPS26BQ4G0F5 336 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 PTRHD1Q6GMV3 140 aaKnown RBP2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 UGT2A3Q6UWM9 527 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 TAS2R42Q7RTR8 314 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ARPINQ7Z6K5 226 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 CALHM3Q86XJ0 350 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 LIX1Q8N485 282 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 MS4A15Q8N5U1 240 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 KRTCAP2Q8N6L1 136 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 CLHC1Q8NHS4 586 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GPR151Q8TDV0 419 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 DNAJC9Q8WXX5 260 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GTF2H4Q92759 462 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 FAM3DQ96BQ1 224 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 TESCQ96BS2 214 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ROPN1LQ96C74 230 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC29A1Q99808 456 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GABRG3Q99928 467 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 LRTM1Q9HBL6 345 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 AGPAT4Q9NRZ5 378 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC23A2Q9UGH3 650 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF222Q9UK12 451 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 NUP50Q9UKX7 468 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 GMEB1Q9Y692 573 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 CDH23Q9H251 3354 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 SCN3AQ9NY46 2000 aa2.12□□□□□ -2.07
HMGB1P11-201ENST00000413899 PDE4DIPQ5VU43 2346 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGLV1-50A0A075B6I6 118 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 A0A096LPI6 279 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 H0YIV9 168 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 KPNA3O00505 521 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 DENRO43583 198 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 STK16O75716 305 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 CIB2O75838 187 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms