RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 GLDNQ6ZMI3 551 aaPredicted RBP15.25■□□□□ 0.03
PHRF1-202ENST00000413872 RNF133Q8WVZ7 376 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 RAB40CQ96S21 281 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 IGKV1-8A0A0C4DH67 115 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 TMEM210A6NLX4 147 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 CYTIPO60759 359 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 ZFP36L2P47974 494 aaKnown RBP15.25■□□□□ 0.03
PHRF1-202ENST00000413872 LCN15Q6UWW0 184 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 SFTPA2Q8IWL1 248 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 VSTM2AQ8TAG5 236 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 RCL1Q9Y2P8 373 aaKnown RBP15.25■□□□□ 0.03
PHRF1-202ENST00000413872 ZNFX1Q9P2E3 1918 aaKnown RBP15.25■□□□□ 0.03
PHRF1-202ENST00000413872 CA11O75493 328 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 GNG10P50151 68 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 C6orf201Q7Z4U5 140 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 RFESDQ8TAC1 157 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 CEP290O15078 2479 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 C3orf80F5H4A9 247 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 UCN2Q96RP3 112 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 RAB18Q9NP72 206 aa15.25■□□□□ 0.03
PHRF1-202ENST00000413872 UMAD1C9J7I0 102 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 GFRA3O60609 400 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 SLC25A6P12236 298 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 M6PRP20645 277 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 OR5AP2Q8NGF4 316 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 NTNG2Q96CW9 530 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 GNG13Q9P2W3 67 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 A0A1W2PN81 502 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 A0A1W2PR77 199 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 PYCARD-AS1I3L0S3 204 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 FCGR3BO75015 233 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 CHRNA7P36544 502 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF787Q6DD87 383 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 C20orf196Q8IYI0 205 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 MAP6Q96JE9 813 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 PARP14Q460N5 1801 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 SEC16AO15027 2179 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 A0A1B0GTH9 108 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 H7BYZ3 331 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 AGFG2O95081 481 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 ACAA2P42765 397 aaKnown RBP15.24■□□□□ 0.03
PHRF1-202ENST00000413872 MPV17LQ2QL34 196 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 OR5A2Q8NGI9 324 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
PHRF1-202ENST00000413872 GZMHP20718 246 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 MMP16P51512 607 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 ADAM19Q9H013 955 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 DTX4Q9Y2E6 619 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 TIMM9Q9Y5J7 89 aa15.24■□□□□ 0.03
PHRF1-202ENST00000413872 NME2P1O60361 137 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 TSPAN2O60636 221 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 FGF7P21781 194 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF528Q3MIS6 628 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 CHRNA10Q9GZZ6 450 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 MASP2O00187 686 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 OR13C7P0DN81 318 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 LPAR6P43657 344 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 Q3ZCU0 254 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 OSGIN2Q9Y236 505 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 B3GALNT1O75752 331 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 OR3A1P47881 315 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 FOXB2Q5VYV0 432 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 FAM122CQ6P4D5 195 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 HEXA-AS1Q9H8Q6 139 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 SEBOXQ9HB31 216 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-202ENST00000413872 IL36GQ9NZH8 169 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 LPAR3Q9UBY5 353 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 LIMK1P53667 647 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 BTN1A1Q13410 526 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 ENDOGQ14249 297 aaKnown RBP15.23■□□□□ 0.03
PHRF1-202ENST00000413872 PDCD1Q15116 288 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-202ENST00000413872 OR4F5Q8NH21 305 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 OR4F4Q96R69 305 aa15.23■□□□□ 0.03
PHRF1-202ENST00000413872 SFT2D2O95562 160 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 FOXO1Q12778 655 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 TMEM171Q8WVE6 324 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 ACY3Q96HD9 319 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 SLC52A3Q9NQ40 469 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 OOEPA6NGQ2 149 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 TXNL1O43396 289 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 AKR7A2O43488 359 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 RPUSD3Q6P087 351 aaKnown RBP15.22■□□□□ 0.03
PHRF1-202ENST00000413872 BAGE3Q86Y29 109 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 BAGE2Q86Y30 109 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 TMEM104Q8NE00 496 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 TUBG2Q9NRH3 451 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 C1RLQ9NZP8 487 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 SH2D7A6NKC9 451 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-202ENST00000413872 CD37P11049 281 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 LINC00596Q86U02 117 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 TMEM251Q8N6I4 163 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 SLC26A10Q8NG04 563 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 OR4S2Q8NH73 311 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 ZNF665Q9H7R5 613 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 COX7A1P24310 79 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 MRGPRDQ8TDS7 321 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 DIRC2Q96SL1 478 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 NAA60Q9H7X0 242 aa15.22■□□□□ 0.03
PHRF1-202ENST00000413872 UQCC1Q9NVA1 299 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms