RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CD300LBA8K4G0 201 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 FAM25EA8MYX2 175 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 OPRM1P35372 400 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 DEFB109BQ30KR1 87 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 NHLRC3Q5JS37 347 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 DYRK2Q92630 601 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 GSX2Q9BZM3 304 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 DECR2Q9NUI1 292 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 AUP1Q9Y679 476 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 A0A0B4J2A0 478 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 LEUTXA8MZ59 168 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 TM4SF5O14894 197 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 RPS2P15880 293 aaKnown RBP17.3■□□□□ 0.36
USP39-204ENST00000409766 HAAOP46952 286 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 TFAP2EQ6VUC0 442 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 SAXO1Q8IYX7 474 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 SLC30A7Q8NEW0 376 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 ZNF2Q9BSG1 426 aaPredicted RBP17.3■□□□□ 0.36
USP39-204ENST00000409766 SHPKQ9UHJ6 478 aa17.3■□□□□ 0.36
USP39-204ENST00000409766 FUT3P21217 361 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 ECI1P42126 302 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 PDCD1Q15116 288 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 SLC9A3R2Q15599 337 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 LRRC37A5PQ49AS3 106 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 ELP2Q6IA86 826 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 OR5A2Q8NGI9 324 aa17.29■□□□□ 0.36
USP39-204ENST00000409766 ZFHX2Q9C0A1 2572 aaPredicted RBP17.28■□□□□ 0.36
USP39-204ENST00000409766 AQP7O14520 342 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 CEACAM4O75871 244 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 OR5H8P0DN80 308 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 CEACAM1P13688 526 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 BCL3P20749 454 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 SERPINF1P36955 418 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 PMELP40967 661 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 GUSBP1Q15486 140 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 GSG1LQ6UXU4 331 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 RFPL4BQ6ZWI9 263 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 TMEM200AQ86VY9 491 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 GCNT2Q8N0V5 402 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 OR6K3Q8NGY3 331 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 TRIB1Q96RU8 372 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 TNFSF18Q9UNG2 199 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A10PA6NDY2 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A18PA6NE21 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A16PA6NEW6 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A20PA6NIJ5 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A8PA6NJQ4 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A7PA6NKC0 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A22PA8MWA6 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A12PA8MX19 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A5PA8MXJ8 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A23PA8MXZ1 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 ZNF732B4DXR9 585 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 EEF1E1-BLOC1S5C9J1V9 151 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A15PP0C7V4 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A13PP0C7W8 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A14PP0C7W9 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM90A24PP0C7X0 464 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 IGHV1-2P23083 117 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 AP2S1P53680 142 aaPredicted RBP17.28■□□□□ 0.36
USP39-204ENST00000409766 ANKRD55Q3KP44 614 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 DHRS11Q6UWP2 260 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM214BQ7L5A3 538 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 BATF2Q8N1L9 274 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 BHLHE23Q8NDY6 225 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 PCNPQ8WW12 178 aaKnown RBP17.28■□□□□ 0.36
USP39-204ENST00000409766 SLAMF9Q96A28 289 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 LIME1Q9H400 295 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 RAB18Q9NP72 206 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 NECAP2Q9NVZ3 263 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 KCNMB2Q9Y691 235 aa17.28■□□□□ 0.36
USP39-204ENST00000409766 FAM221AA4D161 298 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 C5orf51A6NDU8 294 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 ZNF891A8MT65 544 aaPredicted RBP17.27■□□□□ 0.36
USP39-204ENST00000409766 OR7C1O76099 320 aaPredicted RBP17.27■□□□□ 0.36
USP39-204ENST00000409766 PGAM2P15259 253 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 ZNF14P17017 642 aaPredicted RBP17.27■□□□□ 0.36
USP39-204ENST00000409766 RAB14P61106 215 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 ESCO2Q56NI9 601 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 OR5L1Q8NGL2 311 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 COQ8AQ8NI60 647 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 OR5P3Q8WZ94 311 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 RDH8Q9NYR8 311 aa17.27■□□□□ 0.36
USP39-204ENST00000409766 C14orf166Q9Y224 244 aaKnown RBP17.27■□□□□ 0.36
USP39-204ENST00000409766 SPENQ96T58 3664 aaKnown RBP17.27■□□□□ 0.35
USP39-204ENST00000409766 A0A0D9SG52 128 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 C13orf42A0A1B0GVH6 325 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 TUBAL3A6NHL2 446 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 F8VVB4 439 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 F8VWA3 439 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 LILRA1O75019 489 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 B3GALNT1O75752 331 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 FGF12P61328 243 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 ZNF345Q14585 488 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 Q6ZPA2 131 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 NMES1Q9C002 83 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 OR51B6Q9H340 312 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 C12orf4Q9NQ89 552 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 PRR13Q9NZ81 148 aa17.26■□□□□ 0.35
USP39-204ENST00000409766 MTCH1Q9NZJ7 389 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms