RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PRR19A6NJB7 356 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 BCL3P20749 454 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 SPRED2Q7Z698 418 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 GUCD1Q96NT3 240 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 VPS25Q9BRG1 176 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 SPNS1Q9H2V7 528 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 THYN1Q9P016 225 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 CLN8Q9UBY8 286 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 RGPD4Q7Z3J3 1758 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 A0A1B0GVG6 124 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 PTHLHP12272 177 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 TBC1D26Q86UD7 250 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 OR10Z1Q8NGY1 313 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM204Q9BSN7 226 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 KCNK15Q9H427 330 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 CYSLTR2Q9NS75 346 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 PSORS1C1Q9UIG5 152 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 TINAGQ9UJW2 476 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 AHCTF1Q8WYP5 2266 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 IGHV1OR21-1A0A087WYE8 117 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 FTH1P19P0C7X4 201 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 DEFB121Q5J5C9 76 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 FANCMQ8IYD8 2048 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 THADAQ6YHU6 1953 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 HRASP01112 189 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 PNLIPP16233 465 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 CD81P60033 236 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 TIAL1Q01085 375 aaKnown RBP eCLIP7.48□□□□□ -1.211e-15■■■■□ 24.3
SCN9A-203ENST00000409672 SIGLEC14Q08ET2 396 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 CGB2Q6NT52 195 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SLC16A12Q6ZSM3 486 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 C11orf54Q9H0W9 315 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 TBX21Q9UL17 535 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SELENOKQ9Y6D0 94 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 CD3DP04234 171 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 MTNR1BP49286 362 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SLC37A1P57057 533 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 AQP6Q13520 282 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 DHRS11Q6UWP2 260 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 CADM4Q8NFZ8 388 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 FAM222BQ8WU58 562 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 U3KQ87 197 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ARNTP27540 789 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 GSCP56915 257 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 DPTQ07507 201 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 EIF3IQ13347 325 aaKnown RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SLC17A1Q14916 467 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ANKRD55Q3KP44 614 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SLC7A10Q9NS82 523 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 PMS2P2O95744 297 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 HTR1DP28221 377 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 FAM53BQ14153 422 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 CD276Q5ZPR3 534 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF519Q8TB69 540 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 DERL3Q96Q80 235 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 WDR61Q9GZS3 305 aaKnown RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 AUNIPQ9H7T9 357 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 EVA1AQ9H8M9 152 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 RHOFQ9HBH0 211 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 LAMB1P07942 1786 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 C5orf52A6NGY3 159 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ARNTLO00327 626 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 CDIPTO14735 213 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 AVPR2P30518 371 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 WNT3P56703 355 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 RTN4IP1Q8WWV3 396 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF831Q5JPB2 1677 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 OR4C46A6NHA9 309 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 EGR3Q06889 387 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 C19orf35Q6ZS72 473 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 COMMD1Q8N668 190 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SRD5A3Q9H8P0 318 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 GSTZ1O43708 216 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 SFTPCP11686 197 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 COX5AP20674 150 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 EPHA8P29322 1005 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 RPL12P30050 165 aaKnown RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 TCL1AP56279 114 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF117Q03924 483 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 FCRL6Q6DN72 434 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 FAM219AQ8IW50 185 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 RELL2Q8NC24 303 aaPredicted RBP7.48□□□□□ -1.21
SCN9A-203ENST00000409672 ARHGAP5-AS1Q96IT6 56 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 TEX101Q9BY14 249 aa7.48□□□□□ -1.21
SCN9A-203ENST00000409672 IGHV3-23P01764 117 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 MBP02144 154 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 GABRA1P14867 456 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 AESQ08117 197 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 OR8I2Q8N0Y5 310 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 IGHV3-66A0A0C4DH42 116 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 CELA2AP08217 269 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 PRB3Q04118 309 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-203ENST00000409672 OR10A7Q8NGE5 316 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 ZFP64Q9NPA5 681 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 C16orf97H3BN30 126 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 SYT5O00445 386 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 CTGFP29279 349 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 GPR6P46095 362 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms