RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 DIRAS3O95661 229 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 CXCL1P09341 107 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 CCL7P80098 99 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 PLCXD2Q0VAA5 305 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 SSX2Q16385 188 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 KHDC3LQ587J8 217 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 TRIM61Q5EBN2 209 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 ZNF343Q6P1L6 599 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 HIST3H2BBQ8N257 126 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 APCDD1LQ8NCL9 501 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 OR10S1Q8NGN2 331 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 HPSE2Q8WWQ2 592 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 FAM71F1Q96KD3 344 aaPredicted RBP13.52□□□□□ -0.24
LIMS2-205ENST00000409455 JSRP1Q96MG2 331 aaPredicted RBP13.52□□□□□ -0.24
LIMS2-205ENST00000409455 GPR61Q9BZJ8 451 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 GPR84Q9NQS5 396 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.24
LIMS2-205ENST00000409455 TNRC6BQ9UPQ9 1833 aaKnown RBP13.52□□□□□ -0.24
LIMS2-205ENST00000409455 NSG1A0A0A6YYJ2 146 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 MS4A18H0YCH9 400 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 RPL36A-HNRNPH2H7BZ11 118 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 SOD3P08294 240 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 ARL6IP1Q15041 203 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 MS4A18Q3C1V0 323 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 HLA-DQA1Q5Y7H0 255 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 OR13D1Q8NGV5 346 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 STT3BQ8TCJ2 826 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF501Q96CX3 271 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-205ENST00000409455 SSX3Q99909 188 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 PECRQ9BY49 303 aa13.52□□□□□ -0.25
LIMS2-205ENST00000409455 CYB5BO43169 146 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 HSF1Q00613 529 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 RTL6Q6ICC9 239 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 OR5D18Q8NGL1 313 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 SOX7Q9BT81 388 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 ADAMTS9Q9P2N4 1935 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 BTBD17A6NE02 478 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 PIGPP57054 158 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 ERVFRD-1P60508 538 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 DLK1P80370 383 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 ZP4Q12836 540 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 IL13RA2Q14627 380 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 GFI1BQ5VTD9 330 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 C1orf189Q5VU69 101 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 WDFY1Q8IWB7 410 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 OR8B12Q8NGG6 310 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 GPR119Q8TDV5 335 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 MVB12AQ96EY5 273 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 LANCL2Q9NS86 450 aa13.51□□□□□ -0.25
LIMS2-205ENST00000409455 RRP8O43159 456 aaKnown RBP13.5□□□□□ -0.25
LIMS2-205ENST00000409455 PTBP3O95758 552 aaKnown RBP13.5□□□□□ -0.25
LIMS2-205ENST00000409455 FABP4P15090 132 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 DCAF7P61962 342 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 NHLH2Q02577 135 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 TLE3Q04726 772 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 LBHQ53QV2 105 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-205ENST00000409455 H1FNTQ75WM6 255 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-205ENST00000409455 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 SMOC1Q9H4F8 434 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 TGIF2-C20orf24A0A0A6YYL0 155 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 TSPAN2O60636 221 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 TRGC2P03986 189 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF121P58317 390 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-205ENST00000409455 OR2T2Q6IF00 324 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 DMRTC2Q8IXT2 367 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-205ENST00000409455 CCDC54Q8NEL0 328 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 NIPSNAP3BQ9BS92 247 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 TGIF2Q9GZN2 237 aa13.5□□□□□ -0.25
LIMS2-205ENST00000409455 NPIPB13A6NJU9 1138 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 DHRS7CA6NNS2 312 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 FOXI3A8MTJ6 420 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-205ENST00000409455 NPIPB4C9JG80 1138 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 H0YL77 283 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 HSD17B6O14756 317 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 TOX3O15405 576 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-205ENST00000409455 IGKV3-11P04433 115 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 NDUFB7P17568 137 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 KLK2P20151 261 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF266Q14584 549 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 PPA1Q15181 289 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 SP6Q3SY56 376 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ABCA11PQ4W5N1 156 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 SLC23A3Q6PIS1 610 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 FBXW12Q6X9E4 464 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 PRO1933Q9H354 126 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF724A8MTY0 619 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ADAM10O14672 748 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 TERTO14746 1132 aaKnown RBP13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ST8SIA3O43173 380 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 OR5AC1P0C628 307 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 DUSP1P28562 367 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 RND3P61587 244 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 LSM6P62312 80 aaKnown RBP13.49□□□□□ -0.25
LIMS2-205ENST00000409455 KISS1Q15726 138 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms