RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MED22Q15528 200 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TRIQKQ629K1 86 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TMEM88Q6PEY1 159 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 FAM131AQ6UXB0 335 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TSEN54Q7Z6J9 526 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 HSD17B11Q8NBQ5 300 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 CCDC54Q8NEL0 328 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 OR4F15Q8NGB8 312 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 OR4K5Q8NGD3 323 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 COQ8AQ8NI60 647 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 MCHR2Q969V1 340 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 NUDT11Q96G61 164 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 FOXN4Q96NZ1 517 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 MRPL13Q9BYD1 178 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 ZNF442Q9H7R0 627 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TMEM38BQ9NVV0 291 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TENM1Q9UKZ4 2725 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TCRBV5S2A0A599 114 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 ANXA2P2A6NMY6 339 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 DHHO43323 396 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 CDC14BO60729 498 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 RP2O75695 350 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 ZNF682O95780 498 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 HIST1H2ABP04908 130 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 ADRA2AP08913 450 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 SLC25A16P16260 332 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 NCK1P16333 377 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 TGFBR1P36897 503 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 MNDAP41218 407 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 RBM34P42696 430 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 ALDH3B1P43353 468 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 GSK3BP49841 420 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 CLRN1P58418 232 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 DSCR9P59020 149 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 AP3S2P59780 193 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 LSM6P62312 80 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 SELENOWP63302 87 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 RELBQ01201 579 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 IL5RAQ01344 420 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 FHL1Q13642 323 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 MAD2L1BPQ15013 274 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 TBPL2Q6SJ96 375 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 HIST3H2AQ7L7L0 130 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 CBLN2Q8IUK8 224 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 ARIH2OSQ8N7S6 290 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 NOXO1Q8NFA2 376 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 OR11H7Q8NGC8 314 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 CD300LFQ8TDQ1 290 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 HIST1H2ACQ93077 130 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 UPRTQ96BW1 309 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 SEPHS2Q99611 448 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 SYT3Q9BQG1 590 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 ALG8Q9BVK2 526 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 BPESC1Q9GZL8 116 aa8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 GAR1Q9NY12 217 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-202ENST00000409020 TRAV27A0A087WT01 109 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 LRP5LA4QPB2 252 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 FABP12A6NFH5 140 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 J3QW42 95 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 CXCR6O00574 342 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 OR10H3O60404 316 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 UBL3O95164 117 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 RAB36O95755 333 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 FADS2O95864 444 aaKnown RBP8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 SERPINA1P01009 418 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 IGHG1P01857 330 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 RPLP1P05386 114 aaKnown RBP8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 USF1P22415 310 aaPredicted RBP8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 IL2RGP31785 369 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 PPOXP50336 477 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 SELENOVP59797 346 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 ERVS71-1P61550 626 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 CNN3Q15417 329 aaKnown RBP8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 SNAPC1Q16533 368 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 ALKBH6Q3KRA9 238 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 MOGAT2Q3SYC2 334 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 LEMD1Q68G75 181 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 NRMQ8IXM6 262 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 FTMTQ8N4E7 242 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 OR5D18Q8NGL1 313 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 OR2G2Q8NGZ5 317 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 POP5Q969H6 163 aaKnown RBP8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 BPIFA2Q96DR5 249 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 HSH2DQ96JZ2 352 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 PRRC1Q96M27 445 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 PRRT1Q99946 306 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 CSTL1Q9H114 145 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 OR51J1Q9H342 316 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 ORC6Q9Y5N6 252 aa8.27□□□□□ -1.08
NIF3L1-202ENST00000409020 CHD3Q12873 2000 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 TLX2O43763 284 aaPredicted RBP8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 MMP7P09237 267 aaPredicted RBP8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 PDLIM4P50479 330 aa8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 RSU1Q15404 277 aa8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 ALG10Q5BKT4 473 aa8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 OR8G2PQ6IF36 304 aa8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 FAHD2BQ6P2I3 314 aaPredicted RBP8.27□□□□□ -1.09
NIF3L1-202ENST00000409020 IL17RELQ6ZVW7 336 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms