RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 IKZF1Q13422 519 aa10.38□□□□□ -0.75
PCNX4-204ENST00000406949 VAX1Q5SQQ9 334 aa10.38□□□□□ -0.75
PCNX4-204ENST00000406949 RPL7L1Q6DKI1 246 aaKnown RBP10.38□□□□□ -0.75
PCNX4-204ENST00000406949 KCNE4Q8WWG9 221 aa10.38□□□□□ -0.75
PCNX4-204ENST00000406949 SPSB1Q96BD6 273 aa10.38□□□□□ -0.75
PCNX4-204ENST00000406949 ADAT1Q9BUB4 502 aaKnown RBP10.38□□□□□ -0.75
PCNX4-204ENST00000406949 FAM96BQ9Y3D0 163 aa10.38□□□□□ -0.75
PCNX4-204ENST00000406949 NUP210LQ5VU65 1888 aa10.38□□□□□ -0.75
PCNX4-204ENST00000406949 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 NDUFS6O75380 124 aaKnown RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 IGHEP01854 428 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 PRF1P14222 555 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 SUCLG1P53597 346 aaKnown RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ARF1P84077 181 aaKnown RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF92Q03936 586 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 RTL6Q6ICC9 239 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 FBXW12Q6X9E4 464 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 CPT1CQ8TCG5 803 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 PCDHB16Q9NRJ7 776 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF581Q9P0T4 197 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ANXA10Q9UJ72 324 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 CEP192Q8TEP8 1941 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 MED19A0JLT2 244 aaPredicted RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 GPR31O00270 319 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF16P17020 682 aaPredicted RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 PCP4P48539 62 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 CYB5R2Q6BCY4 276 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ATRAIDQ6UW56 229 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 HSD17B11Q8NBQ5 300 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 CA5BP1Q8WTZ4 195 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 IL1F10Q8WWZ1 152 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 MRGPRFQ96AM1 343 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 PIK3IP1Q96FE7 263 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 SYT3Q9BQG1 590 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 OCSTAMPQ9BR26 566 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 GLS2Q9UI32 602 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 DMDP11532 3685 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 FREM1Q5H8C1 2179 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 OR6C6A6NF89 314 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF587BE7ETH6 402 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 GP1BAP07359 652 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 RCC1P18754 421 aaPredicted RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ASCL1P50553 236 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 GPM6AP51674 278 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF345Q14585 488 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 H3F3CQ6NXT2 135 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 LHFPL2Q6ZUX7 228 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 TMEM123Q8N131 208 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 MRPL24Q96A35 216 aaKnown RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 SULT4A1Q9BR01 284 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 REG4Q9BYZ8 158 aa10.37□□□□□ -0.75
PCNX4-204ENST00000406949 MYOZ1Q9NP98 299 aaPredicted RBP10.37□□□□□ -0.75
PCNX4-204ENST00000406949 H7C2Y5 167 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 TNFSF12O43508 249 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 F12P00748 615 aaPredicted RBP10.36□□□□□ -0.75
PCNX4-204ENST00000406949 IL2RAP01589 272 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 OR5AC1P0C628 307 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 PVALBP20472 110 aaPredicted RBP10.36□□□□□ -0.75
PCNX4-204ENST00000406949 MPLP40238 635 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 C10orf128Q5T292 105 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 PRSS54Q6PEW0 395 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 PPP1R32Q7Z5V6 425 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 LURAP1LQ8IV03 231 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 SKA3Q8IX90 412 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 ZIC4Q8N9L1 334 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 TMEM54Q969K7 222 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 SLAMF9Q96A28 289 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 TMEM230Q96A57 120 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 RRNAD1Q96FB5 475 aaKnown RBP10.36□□□□□ -0.75
PCNX4-204ENST00000406949 NMES1Q9C002 83 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 KIAA2026Q5HYC2 2103 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 LOC102723996A0A087X1L8 192 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 HSPA12AO43301 675 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 FGF2P09038 288 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 EPHA1P21709 976 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 PTGER4P35408 488 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 VAMP2P63027 116 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 SPATA46Q5T0L3 261 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 GGNBP1Q5YKI7 109 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 WDR5BQ86VZ2 330 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 OR2H1Q9GZK4 316 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 EIF5A2Q9GZV4 153 aaKnown RBP10.36□□□□□ -0.75
PCNX4-204ENST00000406949 ACACAQ13085 2346 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 ZNF98A6NK75 572 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 HOXD4P09016 255 aaPredicted RBP10.36□□□□□ -0.75
PCNX4-204ENST00000406949 RD3LP0DJH9 198 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 H3F3AP84243 136 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 CLINT1Q14677 625 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 GNMTQ14749 295 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 ARL6IP6Q8N6S5 226 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 CPNE4Q96A23 557 aaPredicted RBP10.36□□□□□ -0.75
PCNX4-204ENST00000406949 NABP1Q96AH0 204 aa10.36□□□□□ -0.75
PCNX4-204ENST00000406949 C1orf147Q96MC9 270 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms