RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TMEM128Q5BJH2 165 aa21.17■□□□□ 0.98
DNMT3A-206ENST00000406659 ELP2Q6IA86 826 aa21.17■□□□□ 0.98
DNMT3A-206ENST00000406659 OR5M8Q8NGP6 311 aa21.17■□□□□ 0.98
DNMT3A-206ENST00000406659 LHX6Q9UPM6 363 aa21.17■□□□□ 0.98
DNMT3A-206ENST00000406659 CEP250Q9BV73 2442 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A10PA6NDY2 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A18PA6NE21 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A16PA6NEW6 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A20PA6NIJ5 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A8PA6NJQ4 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A7PA6NKC0 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A22PA8MWA6 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A12PA8MX19 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A5PA8MXJ8 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A23PA8MXZ1 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 OR7C1O76099 320 aaPredicted RBP21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 DUS4LO95620 317 aaKnown RBP21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FCGR3AP08637 254 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A15PP0C7V4 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A13PP0C7W8 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A14PP0C7W9 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FAM90A24PP0C7X0 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 COX5AP20674 150 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 OPRM1P35372 400 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 GMFBP60983 142 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 AADACL3Q5VUY0 350 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 FBXW12Q6X9E4 464 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 C1orf162Q8NEQ5 155 aaPredicted RBP21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 ELMOD3Q96FG2 381 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 C5orf66Q9H5L9 145 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 DKK4Q9UBT3 224 aa21.16■□□□□ 0.98
DNMT3A-206ENST00000406659 OR5B21A6NL26 309 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 SMPD2O60906 423 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 LILRA1O75019 489 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 CBR1P16152 277 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 GNG3P63215 75 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 PEG10Q86TG7 708 aaKnown RBP21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 ZNF573Q86YE8 665 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 RBMXL3Q8N7X1 1067 aaKnown RBP21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 LILRB4Q8NHJ6 448 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 DYRK2Q92630 601 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 CLEC4MQ9H2X3 399 aaPredicted RBP21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 ZNF442Q9H7R0 627 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 PROCRQ9UNN8 238 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 PRSS44E7EML9 344 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 L7N2F9 121 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 MSTNO14793 375 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 CRYABP02511 175 aaKnown RBP21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 PGAM2P15259 253 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 CA6P23280 308 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 PMELP40967 661 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 FGF12P61328 243 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 MTCH1Q9NZJ7 389 aa21.15■□□□□ 0.98
DNMT3A-206ENST00000406659 FXYD6-FXYD2A0A087WZ82 144 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 OR5H14A6NHG9 310 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 HMSDA8MTL9 139 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 SEC61A1P61619 476 aaKnown RBP21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 FOXC1Q12948 553 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 BAMBIQ13145 260 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 SURF2Q15527 256 aaPredicted RBP21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 KCTD9Q7L273 389 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 CCDC120Q96HB5 630 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 BOD1Q96IK1 185 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 RTBDNQ9BSG5 229 aaPredicted RBP21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 PDCD10Q9BUL8 212 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 DPCDQ9BVM2 203 aaPredicted RBP21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 FXYD6Q9H0Q3 95 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 HEXA-AS1Q9H8Q6 139 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 NECAP2Q9NVZ3 263 aa21.14■□□□□ 0.97
DNMT3A-206ENST00000406659 MCRIP1C9JLW8 97 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 NOS1APO75052 506 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 PPP3CBP16298 524 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 HLA-GP17693 338 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 CXCL2P19875 107 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 HTR2BP41595 481 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 ECI1P42126 302 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 SORDQ00796 357 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 HAGHLQ6PII5 290 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 TEX261Q6UWH6 196 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 ZNF610Q8N9Z0 462 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 WDR31Q8NA23 367 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 ZNF2Q9BSG1 426 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 C1QTNF6Q9BXI9 259 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 OR2J1Q9GZK6 312 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 U3KQ87 197 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 FAM221AA4D161 298 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 MBD3L4A6NDZ8 208 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 MBD3L3A6NE82 208 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 MBD3L5A6NJ08 208 aaPredicted RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 MKRN2OSH3BPM6 223 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 K7EM74 188 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 CCSO14618 274 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 SYNGR1O43759 233 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 AGFG2O95081 481 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 OR5H8P0DN80 308 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 PI3P19957 117 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 SPINK2P20155 84 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 SRSF4Q08170 494 aaKnown RBP21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 NHLRC3Q5JS37 347 aa21.13■□□□□ 0.97
DNMT3A-206ENST00000406659 TMEM211Q6ICI0 200 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms