RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	CCL3	P10147	92 aa		11.77	□□□□□ -0.52
CACNA1C-222	ENST00000406454	LPAR6	P43657	344 aa		11.77	□□□□□ -0.52
CACNA1C-222	ENST00000406454	TRAT1	Q6PIZ9	186 aa		11.77	□□□□□ -0.52
CACNA1C-222	ENST00000406454	GVQW1	Q8N7I0	195 aa		11.77	□□□□□ -0.52
CACNA1C-222	ENST00000406454	RASL12	Q9NYN1	266 aa		11.77	□□□□□ -0.52
CACNA1C-222	ENST00000406454	ZNF831	Q5JPB2	1677 aa		11.77	□□□□□ -0.52
CACNA1C-222	ENST00000406454	TGOLN2	O43493	480 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ADAM20	O43506	726 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RFESD	Q8TAC1	157 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CDK5RAP2	Q96SN8	1893 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	NUP205	Q92621	2012 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR4C45	A6NMZ5	311 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CALCR	P30988	508 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	IGFBP7	Q16270	282 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM104	Q8NE00	496 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ASCC3	Q8N3C0	2202 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PRSS12	P56730	875 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SOX8	P57073	446 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZBTB44	Q8NCP5	570 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR2M3	Q8NG83	312 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GLRX2	Q9NS18	164 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PSG11	Q9UQ72	335 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	COX7A2P2	O60397	106 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SCGB1A1	P11684	91 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HNF1A	P20823	631 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR10AC1	Q8NH08	325 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZNF721	Q8TF20	911 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MIXL1	Q9H2W2	232 aa		11.77	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CENPVL1	A0A0U1RR11	272 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PATE3	B3GLJ2	98 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	C21orf140	B9A014	251 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CST2	P09228	141 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SELENOP	P49908	381 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PTTG1IP	P53801	180 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HLX	Q14774	488 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	DGAT2L6	Q6ZPD8	337 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	OR5B3	Q8NH48	314 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454		V9GYS6	101 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	DEFB108A	A8MXU0	73 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	AKR1C3	P42330	323 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	NCR3LG1	Q68D85	454 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TUSC5	Q8IXB3	177 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TM4SF19	Q96DZ7	209 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	KHDC1L	Q5JSQ8	128 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	STUM	Q69YW2	141 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MOB3B	Q86TA1	216 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	WDR54	Q9H977	334 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	DUS4L	O95620	317 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MAGEA5	P43359	124 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	COMMD1	Q8N668	190 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GATC	O43716	136 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FCGR3B	O75015	233 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	C1QC	P02747	245 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ERG	P11308	486 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC6A1	P30531	599 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ZFP36L2	P47974	494 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RAB40C	Q96S21	281 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ESRP2	Q9H6T0	727 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	IGKV1-8	A0A0C4DH67	115 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	B3GALNT1	O75752	331 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM230	Q96A57	120 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TRMT61A	Q96FX7	289 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CXorf58	Q96LI9	332 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	UQCC1	Q9NVA1	299 aa		11.76	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SH2D7	A6NKC9	451 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ACAA2	P42765	397 aa	Known RBP	11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	GNG10	P50151	68 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ASCL1	P50553	236 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	KLF3	P57682	345 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CXXC4	Q9H2H0	198 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FAM96B	Q9Y3D0	163 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PTP4A3	O75365	173 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MPC2	O95563	127 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	NHLRC1	Q6VVB1	395 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ACY3	Q96HD9	319 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CABLES2	Q9BTV7	478 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	MRPS18A	Q9NVS2	196 aa	Known RBP	11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TMEM108	Q6UXF1	575 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	ACTL6A	O96019	429 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454		Q3ZCU0	254 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	PRSS54	Q6PEW0	395 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RNF133	Q8WVZ7	376 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	C10orf35	Q96D05	121 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HRAS	P01112	189 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	TNFAIP6	P98066	277 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	FAM117A	Q9C073	453 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CTRB1	P17538	263 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	C3AR1	Q16581	482 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CTRB2	Q6GPI1	263 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	LYG1	Q8N1E2	194 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	HES7	Q9BYE0	225 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	SLC52A3	Q9NQ40	469 aa		11.75	□□□□□ -0.53
CACNA1C-222	ENST00000406454	RNASEK-C17orf49	H0YIS7	233 aa		11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CTSD	P07339	412 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-222	ENST00000406454	UQCC3	Q6UW78	93 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms