RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 LOC100130705A0A1B0GUX0 176 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 F8VVB4 439 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 F8VWA3 439 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 K7N7A8 449 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 ISG15P05161 165 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 OCM2P0CE71 109 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 OCMP0CE72 109 aaPredicted RBP10.87□□□□□ -0.67
SDF4-203ENST00000403997 DBTP11182 482 aaKnown RBP10.87□□□□□ -0.67
SDF4-203ENST00000403997 PIPP12273 146 aaPredicted RBP10.87□□□□□ -0.67
SDF4-203ENST00000403997 GABRB1P18505 474 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 PRKACBP22694 351 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 POU3F4P49335 361 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 RBP2P50120 134 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 CCR9P51686 369 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 MTCP1P56278 107 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 NANOS3P60323 173 aaKnown RBP10.87□□□□□ -0.67
SDF4-203ENST00000403997 ACTA2P62736 377 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 ACTG2P63267 376 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 ZNF91Q05481 1191 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 GALEQ14376 348 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 TAF9Q16594 264 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 OLFML2AQ68BL7 652 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 HCP5Q6MZN7 132 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 GDPGP1Q6ZNW5 385 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 DNAAF1Q8NEP3 725 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 RHOXF1Q8NHV9 184 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 ALG8Q9BVK2 526 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 FAM118AQ9NWS6 357 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 HHLA2Q9UM44 414 aa10.87□□□□□ -0.67
SDF4-203ENST00000403997 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 FADS2O95864 444 aaKnown RBP10.86□□□□□ -0.67
SDF4-203ENST00000403997 CYB5AP00167 134 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 CCL3L1P16619 93 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 EDDM3BP56851 147 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 ERVFRD-1P60508 538 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 ALKBH1Q13686 389 aaKnown RBP10.86□□□□□ -0.67
SDF4-203ENST00000403997 ZNF273Q14593 569 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 MIDNQ504T8 468 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 C17orf107Q6ZR85 190 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 GDPD3Q7L5L3 318 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 Q8IYB0 196 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 ZNF676Q8N7Q3 588 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 OR10AC1Q8NH08 325 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 C17orf50Q8WW18 174 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 EMG1Q92979 244 aaKnown RBP10.86□□□□□ -0.67
SDF4-203ENST00000403997 ZNF696Q9H7X3 374 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 MYRFQ9Y2G1 1151 aa10.86□□□□□ -0.67
SDF4-203ENST00000403997 OR4C45A6NMZ5 311 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 HAND1O96004 215 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 CALCBP10092 127 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 BCL3P20749 454 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 COX7A1P24310 79 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 AZGP1P25311 298 aaKnown RBP10.85□□□□□ -0.67
SDF4-203ENST00000403997 NPBWR2P48146 333 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 LGALS4P56470 323 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
SDF4-203ENST00000403997 RAB40BQ12829 278 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 PRR31Q5SQ13 230 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 DHRS7BQ6IAN0 325 aaPredicted RBP10.85□□□□□ -0.67
SDF4-203ENST00000403997 LHFPL2Q6ZUX7 228 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 C11orf42Q8N5U0 333 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 BEND2Q8NDZ0 799 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 ZNF555Q8NEP9 628 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 OR51A4Q8NGJ6 313 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 OR5R1Q8NH85 324 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 STMN2Q93045 179 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 RFT1Q96AA3 541 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 SPSB1Q96BD6 273 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 SNX22Q96L94 193 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 SSX3Q99909 188 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 ISG20L2Q9H9L3 353 aaKnown RBP10.85□□□□□ -0.67
SDF4-203ENST00000403997 INPP5EQ9NRR6 644 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 RBFOX1Q9NWB1 397 aaKnown RBP10.85□□□□□ -0.67
SDF4-203ENST00000403997 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 RPL36Q9Y3U8 105 aaKnown RBP10.85□□□□□ -0.67
SDF4-203ENST00000403997 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
SDF4-203ENST00000403997 TRBV2A0A0J9YWF9 115 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 TMEM82A0PJX8 343 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 MEX3AA1L020 520 aaKnown RBP10.84□□□□□ -0.67
SDF4-203ENST00000403997 H3BUX3 64 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 ZNF737O75373 536 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 IGHA1P01876 353 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 PRKACAP17612 351 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 DUSP1P28562 367 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 TGFBR2P37173 567 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 GBX2P52951 348 aaPredicted RBP10.84□□□□□ -0.67
SDF4-203ENST00000403997 SNU13P55769 128 aaKnown RBP10.84□□□□□ -0.67
SDF4-203ENST00000403997 PDZK1IP1Q13113 114 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 KLHL22Q53GT1 634 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 ZNF782Q6ZMW2 699 aaPredicted RBP10.84□□□□□ -0.67
SDF4-203ENST00000403997 OR8H2Q8N162 312 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 FAM58AQ8N1B3 248 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 ZSCAN4Q8NAM6 433 aaPredicted RBP10.84□□□□□ -0.67
SDF4-203ENST00000403997 OR52I1Q8NGK6 324 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 OR5AK2Q8NH90 309 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms