RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 MTNR1BP49286 362 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 ATP1B3P54709 279 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 MTCP1P56278 107 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 TMEM33P57088 247 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 PPP3R1P63098 170 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 PDZK1IP1Q13113 114 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 BLMHQ13867 455 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 DMRTC1Q5HYR2 192 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 C1orf100Q5SVJ3 147 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 TEX36Q5VZQ5 186 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 C22orf42Q6IC83 251 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 GPR141Q7Z602 305 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 MOGAT3Q86VF5 341 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 TPRA1Q86W33 373 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 NR2C2APQ86WQ0 139 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 GCSAMQ8N6F7 178 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 POC1AQ8NBT0 407 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 PXT1Q8NFP0 134 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 BORCS8Q96FH0 119 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 C1orf147Q96MC9 270 aaPredicted RBP7.69□□□□□ -1.18
VPS53-203ENST00000401468 NRIP2Q9BQI9 281 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 CENPOQ9BU64 300 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 RBM38Q9H0Z9 239 aaKnown RBP7.69□□□□□ -1.18
VPS53-203ENST00000401468 SEBOXQ9HB31 216 aaPredicted RBP7.69□□□□□ -1.18
VPS53-203ENST00000401468 TCF7L1Q9HCS4 588 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 TMEM106BQ9NUM4 274 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 IL36GQ9NZH8 169 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 KCNS2Q9ULS6 477 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 IGKV1-12A0A0C4DH73 117 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 FAM230AA0A1W2PPH8 454 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 CDIPTO14735 213 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 TNFRSF13BO14836 293 aaPredicted RBP7.68□□□□□ -1.18
VPS53-203ENST00000401468 SLC22A1O15245 554 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 AIREO43918 545 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 TMEM127O75204 238 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 RHBDL1O75783 438 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 KDM4BO94953 1096 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 IGKV1D-12P01611 117 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 IGHV2-70P01814 119 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 FAM157CP0CG43 387 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 ZNF93P35789 620 aaPredicted RBP7.68□□□□□ -1.18
VPS53-203ENST00000401468 HAAOP46952 286 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 GZMKP49863 264 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 PSMD7P51665 324 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 TMBIM6P55061 237 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 HFEQ30201 348 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 DDI2Q5TDH0 399 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 ELP2Q6IA86 826 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 ZNF826PQ6ZT77 177 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 FAM90A1Q86YD7 464 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 C1orf87Q8N0U7 546 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 CLDND2Q8NHS1 167 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 ZNF420Q8TAQ5 688 aaPredicted RBP7.68□□□□□ -1.18
VPS53-203ENST00000401468 TRMT10AQ8TBZ6 339 aaKnown RBP7.68□□□□□ -1.18
VPS53-203ENST00000401468 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 FOXRED1Q96CU9 486 aaPredicted RBP7.68□□□□□ -1.18
VPS53-203ENST00000401468 KCTD7Q96MP8 289 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 CHCHD6Q9BRQ6 235 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 C1orf123Q9NWV4 160 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 DCAF16Q9NXF7 216 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 RASL12Q9NYN1 266 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 MTCH1Q9NZJ7 389 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 RNF7Q9UBF6 113 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 CDC42EP3Q9UKI2 254 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 GSTK1Q9Y2Q3 226 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 POLDIP2Q9Y2S7 368 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 NPTNQ9Y639 398 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 PKD1L1Q8TDX9 2849 aa7.68□□□□□ -1.18
VPS53-203ENST00000401468 IGHV3-64DA0A0J9YX35 117 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 LRRC30A6NM36 301 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 ZNF701M0R085 212 aaPredicted RBP7.67□□□□□ -1.18
VPS53-203ENST00000401468 SLC17A2O00624 439 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 MAGEB3O15480 346 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 TPD52L2O43399 206 aaKnown RBP7.67□□□□□ -1.18
VPS53-203ENST00000401468 PPIHO43447 177 aaKnown RBP7.67□□□□□ -1.18
VPS53-203ENST00000401468 SYNGR1O43759 233 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 MAS1P04201 325 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 GRPP07492 148 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 HCKP08631 526 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 CPT2P23786 658 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 PTGFRP43088 359 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 QRFPP83859 136 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 NHLRC3Q5JS37 347 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 GPR107Q5VW38 600 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 GLT8D1Q68CQ7 371 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 HAGHLQ6PII5 290 aaPredicted RBP7.67□□□□□ -1.18
VPS53-203ENST00000401468 SLC25A26Q70HW3 274 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 C1QL2Q7Z5L3 287 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 SATL1Q86VE3 508 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 ANGPTL5Q86XS5 388 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 MKXQ8IYA7 352 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 Q8IYB0 196 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 OR4D6Q8NGJ1 314 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 OR6M1Q8NGM8 313 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 OR11L1Q8NGX0 322 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 ZNF671Q8TAW3 534 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 TBC1D15Q8TC07 691 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 NPRL2Q8WTW4 380 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 RAB2BQ8WUD1 216 aa7.67□□□□□ -1.18
VPS53-203ENST00000401468 C12orf43Q96C57 262 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms