RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 BGLAPP02818 100 aa16.08■□□□□ 0.17
COL18A1-204ENST00000400337 TMEM108Q6UXF1 575 aa16.08■□□□□ 0.17
COL18A1-204ENST00000400337 NUFIP2Q7Z417 695 aaKnown RBP16.08■□□□□ 0.17
COL18A1-204ENST00000400337 OR51I2Q9H344 312 aa16.08■□□□□ 0.17
COL18A1-204ENST00000400337 IGHV3-43A0A0B4J1X8 118 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 C3orf80F5H4A9 247 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 COX7A2P2O60397 106 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 IGHV3-43DP0DP04 118 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 LPAR6P43657 344 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 MLF1P58340 268 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 DGAT2L6Q6ZPD8 337 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 SLC22A18ASQ8N1D0 253 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 MYOZ1Q9NP98 299 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-204ENST00000400337 RASL12Q9NYN1 266 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 F2RP25116 425 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 KLF3P57682 345 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-204ENST00000400337 TMEM267Q0VDI3 215 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-204ENST00000400337 SPICQ8N5J4 248 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 CABLES2Q9BTV7 478 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 PECRQ9BY49 303 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 TGIF2Q9GZN2 237 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 PLXNB2O15031 1838 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 CEP290O15078 2479 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 OR5B21A6NL26 309 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 METTL15P1P0C7V9 234 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 Q3ZCU0 254 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 ZNF721Q8TF20 911 aa16.08■□□□□ 0.16
COL18A1-204ENST00000400337 OR4C45A6NMZ5 311 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 ST8SIA5O15466 376 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 TNFAIP6P98066 277 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-204ENST00000400337 NAA60Q9H7X0 242 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 ZNF835Q9Y2P0 537 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 ANKRD31Q8N7Z5 1873 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 PGA3P0DJD8 388 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 PIK3IP1Q96FE7 263 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 MDH2P40926 338 aaKnown RBP16.07■□□□□ 0.16
COL18A1-204ENST00000400337 ACAA2P42765 397 aaKnown RBP16.07■□□□□ 0.16
COL18A1-204ENST00000400337 VMA21Q3ZAQ7 101 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 GGNBP1Q5YKI7 109 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 ABHD3Q8WU67 409 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 RYDENQ9NUL5 291 aaKnown RBP16.07■□□□□ 0.16
COL18A1-204ENST00000400337 ONECUT1Q9UBC0 465 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 DNAJC13O75165 2243 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 SCN3AQ9NY46 2000 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 CST4P01036 141 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 IGKV1D-16P01601 117 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 OR5AC1P0C628 307 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 PNLIPP16233 465 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 CTRB1P17538 263 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 CTRB2Q6GPI1 263 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 MPC1Q9Y5U8 109 aa16.07■□□□□ 0.16
COL18A1-204ENST00000400337 C21orf140B9A014 251 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 ISXQ2M1V0 245 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 OR2M3Q8NG83 312 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 MRGPRDQ8TDS7 321 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 WDR13Q9H1Z4 485 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 SLC26A1Q9H2B4 701 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 V9GYH0 126 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 NCR3LG1Q68D85 454 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 AKR1E2Q96JD6 320 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 DUS4LO95620 317 aaKnown RBP16.06■□□□□ 0.16
COL18A1-204ENST00000400337 OR3A1P47881 315 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 HLXQ14774 488 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-204ENST00000400337 PLAC9Q5JTB6 97 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 OR2D2Q9H210 308 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 SOCS1O15524 211 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 SLC6A1P30531 599 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 IRF3Q14653 427 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 CLPPQ16740 277 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-204ENST00000400337 PRR27Q6MZM9 219 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 CA5BP1Q8WTZ4 195 aa16.06■□□□□ 0.16
COL18A1-204ENST00000400337 MPC2O95563 127 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 KCNJ3P48549 501 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 MIXL1Q9H2W2 232 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 RGPD4Q7Z3J3 1758 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 NCBP2LA6PVI3 153 aaKnown RBP16.05■□□□□ 0.16
COL18A1-204ENST00000400337 CHEK1O14757 476 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 MIDNQ504T8 468 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 CLLU1Q5K131 121 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 UQCC1Q9NVA1 299 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 IGHV3-13P01766 116 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 IGHV3-7P01780 117 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 HFEQ30201 348 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 C4orf17Q53FE4 359 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 BARX1Q9HBU1 254 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-204ENST00000400337 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-204ENST00000400337 HRASP01112 189 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 CST2P09228 141 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 IGFBP7Q16270 282 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 DUSP18Q8NEJ0 188 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 OR10AD1Q8NGE0 317 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 CACNG5Q9UF02 275 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 TRAV8-7A0A075B6U6 113 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 AKR1C3P42330 323 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 RPS4XP62701 263 aaKnown RBP16.05■□□□□ 0.16
COL18A1-204ENST00000400337 OR5C1Q8NGR4 320 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 ZNF501Q96CX3 271 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-204ENST00000400337 WDR54Q9H977 334 aa16.05■□□□□ 0.16
COL18A1-204ENST00000400337 HES4Q9HCC6 221 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms