RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 CT55Q8WUE5 264 aa16.26■□□□□ 0.19
USP48-204ENST00000400301 PPP1R3CQ9UQK1 317 aa16.26■□□□□ 0.19
USP48-204ENST00000400301 GPR31O00270 319 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 TXNL1O43396 289 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 DFFBO76075 338 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 CST7O76096 145 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 CD74P04233 296 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 CST2P09228 141 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 GABRA2P47869 451 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 TMEM33P57088 247 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 PRDX4Q13162 271 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 OR14K1Q8NGZ2 314 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 NPTNQ9Y639 398 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 MPDZO75970 2070 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 UMAD1C9J7I0 102 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 MASP2O00187 686 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 MPLP40238 635 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 MLF1P58340 268 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 FAM27BQ5VT28 67 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 TMEM38BQ9NVV0 291 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 DOCK8Q8NF50 2099 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 ERVK-16P61578 105 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 CFHR1Q03591 330 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 RGS7BPQ6MZT1 257 aaPredicted RBP16.25■□□□□ 0.19
USP48-204ENST00000400301 FAM185AQ8N0U4 392 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 ZFP62Q8NB50 900 aaPredicted RBP16.25■□□□□ 0.19
USP48-204ENST00000400301 GPR132Q9UNW8 380 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 HS3ST3B1Q9Y662 390 aa16.25■□□□□ 0.19
USP48-204ENST00000400301 A0A0U1RQV5 110 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 TMEM218A2RU14 115 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 H3BP45 60 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 GLAP06280 429 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 SPINK2P20155 84 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 AKR1C3P42330 323 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 UNC119Q13432 240 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 MRPL24Q96A35 216 aaKnown RBP16.24■□□□□ 0.19
USP48-204ENST00000400301 MRPS24Q96EL2 167 aaKnown RBP16.24■□□□□ 0.19
USP48-204ENST00000400301 AKR1E2Q96JD6 320 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 NPAS1Q99742 590 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 GNG12Q9UBI6 72 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 DUSP13Q9UII6 198 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 POLDIP2Q9Y2S7 368 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 STRAPQ9Y3F4 350 aaKnown RBP16.24■□□□□ 0.19
USP48-204ENST00000400301 VSTM5A8MXK1 200 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 PIGYQ3MUY2 71 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 CLEC9AQ6UXN8 241 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 C1orf210Q8IVY1 113 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 DYRK2Q92630 601 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 TMED3Q9Y3Q3 217 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 TMEM14DPA8MWL7 114 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 HAGHQ16775 308 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 OR13G1Q8NGZ3 307 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 UBALD1Q8TB05 177 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 IP6K3Q96PC2 410 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 SOX7Q9BT81 388 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 UFSP2Q9NUQ7 469 aa16.24■□□□□ 0.19
USP48-204ENST00000400301 ALDH3B1P43353 468 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 NIPSNAP3BQ9BS92 247 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 ANGPTL4Q9BY76 406 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 RIMS4Q9H426 269 aaPredicted RBP16.23■□□□□ 0.19
USP48-204ENST00000400301 PLK3Q9H4B4 646 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 B3GAT1Q9P2W7 334 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 SFTA3P0C7M3 94 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 MIDNQ504T8 468 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
USP48-204ENST00000400301 PURGQ9UJV8 347 aaKnown RBP16.23■□□□□ 0.19
USP48-204ENST00000400301 EP300Q09472 2414 aaPredicted RBP16.23■□□□□ 0.19
USP48-204ENST00000400301 GPR179Q6PRD1 2367 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 IGHV1-45A0A0A0MS14 117 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 FGF5P12034 268 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 OR8G1Q15617 311 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 OR8G2PQ6IF36 304 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 VHLLQ6RSH7 139 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 OR2H1Q9GZK4 316 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 ZNF724A8MTY0 619 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 SIGLEC5O15389 551 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 SIGLEC14Q08ET2 396 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 OR2T2Q6IF00 324 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 DHRS13Q6UX07 377 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 ZNF574Q6ZN55 896 aaPredicted RBP16.23■□□□□ 0.19
USP48-204ENST00000400301 FN3KRPQ9HA64 309 aa16.23■□□□□ 0.19
USP48-204ENST00000400301 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 ONECUT2O95948 504 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 GNPNAT1Q96EK6 184 aaPredicted RBP16.22■□□□□ 0.19
USP48-204ENST00000400301 GPR35Q9HC97 309 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 ZFP92A6NM28 416 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 TRIM77I1YAP6 450 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 CLPSP04118 112 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 GNG3P63215 75 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 S100PBPQ96BU1 408 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 SDSLQ96GA7 329 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 MED19A0JLT2 244 aaPredicted RBP16.22■□□□□ 0.19
USP48-204ENST00000400301 DNPH1O43598 174 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 TAGLN2P37802 199 aaKnown RBP16.22■□□□□ 0.19
USP48-204ENST00000400301 PCOLCEQ15113 449 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 WDSUB1Q8N9V3 476 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 SLC39A9Q9NUM3 307 aa16.22■□□□□ 0.19
USP48-204ENST00000400301 MFSD2BA6NFX1 497 aa16.21■□□□□ 0.19
USP48-204ENST00000400301 HPP00738 406 aa16.21■□□□□ 0.19
USP48-204ENST00000400301 IGFBP3P17936 291 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms