RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FOXB2Q5VYV0 432 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 FOXJ3Q9UPW0 622 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 MYO16Q9Y6X6 1858 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 A0A1B0GTH9 108 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 F5H697 171 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 MPZL1O95297 269 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 DUS4LO95620 317 aaKnown RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ANKRD34CP0C6C1 535 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 PRR35P0CG20 571 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 CSRP1P21291 193 aaKnown RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 NAAAQ02083 359 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 FUT7Q11130 342 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 GAMTQ14353 236 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 KISS1Q15726 138 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 WDR38Q5JTN6 314 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 FAHD1Q6P587 224 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 PPP1R1CQ8WVI7 109 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ARHGAP5-AS1Q96IT6 56 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 SAP30LQ9HAJ7 183 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ZNF629Q9UEG4 869 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 NEU3Q9UQ49 428 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ASPDHA6ND91 283 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 AKR7A2O43488 359 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 GGTLC2Q14390 218 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 Q1RN00 199 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 PP6455Q8WZ26 134 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ZNF501Q96CX3 271 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 YIPF6Q96EC8 236 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 WDR34Q96EX3 536 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 DOK5Q9P104 306 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 FGF5P12034 268 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 ZIC1Q15915 447 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 MRGPRDQ8TDS7 321 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 TSPAN32Q96QS1 320 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 RFPL4AA6NLU0 287 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 RFPL4AL1F8VTS6 287 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 GDF9O60383 454 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 BAK1Q16611 211 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 TIGD3Q6B0B8 471 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 DNAJB12Q9NXW2 375 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 KCNMB2Q9Y691 235 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 SERPINE3A8MV23 424 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 C9orf172C9J069 976 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 EPPINO95925 133 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 C1QBP02746 253 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 PRF1P14222 555 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 KLRB1Q12918 225 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 RASL10BQ96S79 203 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 CXXC4Q9H2H0 198 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 ATP6V1G2-DDX39BF2Z307 99 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 DHRS7BQ6IAN0 325 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 FAHD2BQ6P2I3 314 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 OR2M7Q8NG81 312 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 FAHD2AQ96GK7 314 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 FGF20Q9NP95 211 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-201ENST00000398640 SP1P08047 785 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 CEACAM3P40198 252 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 NCR3LG1Q68D85 454 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 SCNM1Q9BWG6 230 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 A0A1W2PR77 199 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 SH2D5Q6ZV89 423 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 C6orf201Q7Z4U5 140 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 MOGAT3Q86VF5 341 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 Q8IYB0 196 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 LPAR6P43657 344 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 LINC00303Q3SY05 128 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 KRTCAP3Q53RY4 240 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 OR1L4Q8NGR5 311 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 hADV38S2A0JD32 116 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 J3KRW8 73 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 RD3LP0DJH9 198 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 TNXAQ16473 311 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 PNLIPRP3Q17RR3 467 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 TGIF2LXQ8IUE1 241 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 WDR89Q96FK6 387 aaPredicted RBP12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 RAB33BQ9H082 229 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 TMEM272A0A1B0GTI8 110 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 MASP2O00187 686 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 NKX2-2O95096 273 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 NTN1O95631 604 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 CT62P0C5K7 136 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 RNF151Q2KHN1 245 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 PCGF1Q9BSM1 259 aa12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 MS4A7Q9GZW8 240 aaPredicted RBP12.61□□□□□ -0.39
PCDHA11-201ENST00000398640 PTPRZ1P23471 2315 aaPredicted RBP12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 F5P12259 2224 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 ADAM10O14672 748 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
PCDHA11-201ENST00000398640 LSM2Q9Y333 95 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms