RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 LIMS1P48059 325 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 SUCLG1P53597 346 aaKnown RBP13.46□□□□□ -0.25
LSS-202ENST00000397728 FAM27E3Q08E93 113 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 RIPPLY2Q5TAB7 128 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 FAM131CQ96AQ9 280 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 KCNK17Q96T54 332 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 TBPP20226 339 aa13.46□□□□□ -0.26
LSS-202ENST00000397728 PLA2G7Q13093 441 aa13.46□□□□□ -0.26
LSS-202ENST00000397728 DEDD2Q8WXF8 326 aa13.46□□□□□ -0.26
LSS-202ENST00000397728 TMEM272A0A1B0GTI8 110 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 AADACP22760 399 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 SSTR2P30874 369 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 VWA1Q6PCB0 445 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 LRRTM1Q86UE6 522 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 TSNAXQ99598 290 aaKnown RBP13.45□□□□□ -0.26
LSS-202ENST00000397728 RALGAPA1Q6GYQ0 2036 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 IGKV1D-42A0A075B6H8 117 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 CRHP06850 196 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 RPH3ALQ9UNE2 315 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 DOCK4Q8N1I0 1966 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 NOTCH4Q99466 2003 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 IGHV3OR15-7A0A075B7D8 119 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 CBR1P16152 277 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 OR5A2Q8NGI9 324 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 FAM57AQ8TBR7 257 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 ESPL1Q14674 2120 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 WDR81Q562E7 1941 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 SEMG1P04279 462 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 CRYBB2P43320 205 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 PRRX1P54821 245 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 LYSMD2Q8IV50 215 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 SIP14410 1827 aa13.45□□□□□ -0.26
LSS-202ENST00000397728 A0A0B4J2A0 478 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ZIC3O60481 467 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 SPICQ8N5J4 248 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 CELF2-AS1Q8N7Q2 184 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ZNF519Q8TB69 540 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 SHPKQ9UHJ6 478 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 PPIAL4EA0A075B759 164 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 PPIAL4DF5H284 164 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 PPIAL4FP0DN26 164 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 CEACAM3P40198 252 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
LSS-202ENST00000397728 FCN2Q15485 313 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 SPANXN5Q5MJ07 72 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 GPX8Q8TED1 209 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 SLC35E1Q96K37 410 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 PPIAL4AQ9Y536 164 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 C17orf112F2Z3M2 114 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 RAMP1O60894 148 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 TMEM127O75204 238 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 CRYZL1O95825 349 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 HAND1O96004 215 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 IGHA1P01876 353 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 CT45A6P0DMU7 189 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 CT45A5P0DMU8 189 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 CT45A7P0DMV0 189 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ATP5J2P56134 94 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ZNF658BQ4V348 819 aaPredicted RBP13.44□□□□□ -0.26
LSS-202ENST00000397728 CT45A1Q5HYN5 189 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 SLC25A47Q6Q0C1 308 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
LSS-202ENST00000397728 CT45A3Q8NHU0 189 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 PKDREJQ9NTG1 2253 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 KRASP01116 189 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 PPP3CBP16298 524 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 HSD17B11Q8NBQ5 300 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 GPR137Q96N19 417 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 ZNF665Q9H7R5 613 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 KLHDC2Q9Y2U9 406 aa13.44□□□□□ -0.26
LSS-202ENST00000397728 A0A1W2PNV4 684 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 HPNP05981 417 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
LSS-202ENST00000397728 SERPINF1P36955 418 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 VMA21Q3ZAQ7 101 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 ZNF770Q6IQ21 691 aaPredicted RBP13.43□□□□□ -0.26
LSS-202ENST00000397728 C10orf35Q96D05 121 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 OGG1O15527 345 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 TXNDC12O95881 172 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 MDH2P40926 338 aaKnown RBP13.43□□□□□ -0.26
LSS-202ENST00000397728 GABRA4P48169 554 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 TBR1Q16650 682 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 Q6ZT83 130 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 GLCCI1Q86VQ1 547 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 OR4C16Q8NGL9 310 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 KCNK15Q9H427 330 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 OR5H1A6NKK0 313 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 FAM157AC9JC47 383 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 BCL3P20749 454 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 UBE2MP61081 183 aaKnown RBP13.43□□□□□ -0.26
LSS-202ENST00000397728 SRSF6Q13247 344 aaKnown RBP13.43□□□□□ -0.26
LSS-202ENST00000397728 GK2Q14410 553 aaPredicted RBP13.43□□□□□ -0.26
LSS-202ENST00000397728 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 Q3ZCU0 254 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 OR2V2Q96R30 315 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 TMEM200CA6NKL6 621 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 RFPL4AA6NLU0 287 aa13.43□□□□□ -0.26
LSS-202ENST00000397728 RFPL4AL1F8VTS6 287 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms