RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ERVK11-1P61568 191 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 RPS27AP62979 156 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 AGAP6Q5VW22 663 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 TGIF2LYQ8IUE0 185 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 BATF2Q8N1L9 274 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 DTX3Q8N9I9 347 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 POC1AQ8NBT0 407 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 S100A16Q96FQ6 103 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 Q96M66 194 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 NRIP2Q9BQI9 281 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 NICN1Q9BSH3 213 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 TRAF4Q9BUZ4 470 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 TM2D1Q9BX74 207 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 ATG5Q9H1Y0 275 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 HMG20AQ9NP66 347 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 PCDHB16Q9NRJ7 776 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 RBFOX1Q9NWB1 397 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 MAP1AP78559 2803 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 DSCAMO60469 2012 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 FABP12A6NFH5 140 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 GTF2F2P13984 249 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 DNASE1P24855 282 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 CFHR2P36980 270 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 PMELP40967 661 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 FGF12P61328 243 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 CCL8P80075 99 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 ZNF45Q02386 682 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 ZNF79Q15937 498 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 DEFB113Q30KQ7 82 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 PCGF3Q3KNV8 242 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 METAP1DQ6UB28 335 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 MOGAT3Q86VF5 341 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 OSR2Q8N2R0 312 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM89BQ8N5H3 189 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 MRPS24Q96EL2 167 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 GAL3ST1Q99999 423 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 SELENOIQ9C0D9 397 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 FN3KRPQ9HA64 309 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 UBTD1Q9HAC8 227 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 RHOFQ9HBH0 211 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 C1orf123Q9NWV4 160 aa14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 FBXO9Q9UK97 447 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-205ENST00000397406 METTL21EPA6NDL7 271 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 C3orf80F5H4A9 247 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 RAB27BO00194 218 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 AKR7A2O43488 359 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 TALDO1P37837 337 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 MADCAM1Q13477 382 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 ZNF846Q147U1 533 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 PIGYQ3MUY2 71 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 MOGAT2Q3SYC2 334 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 NHLRC3Q5JS37 347 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM131AQ6UXB0 335 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 Q8IYB0 196 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 WFDC11Q8NEX6 87 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 OR51T1Q8NGJ9 327 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 OR10Z1Q8NGY1 313 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 Q8TCH9 128 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 ERGIC1Q969X5 290 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 URM1Q9BTM9 101 aaKnown RBP14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 WDR12Q9GZL7 423 aaKnown RBP14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 HES4Q9HCC6 221 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 GCM1Q9NP62 436 aa14.27□□□□□ -0.12
TSPAN4-205ENST00000397406 A0A0A6YYH2 397 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 A6NJ64 397 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 FOXI3A8MTJ6 420 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 XRCC3O43542 346 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 TNFRSF1AP19438 455 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 PTBP1P26599 531 aaKnown RBP eCLIP14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 RBMXP38159 391 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 VEGFCP49767 419 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 RBM11P57052 281 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM189A2Q15884 450 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 IZUMO1Q8IYV9 350 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 EGLN1Q9GZT9 426 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 SAP30LQ9HAJ7 183 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 DIABLOQ9NR28 239 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 DECR2Q9NUI1 292 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 IL36RNQ9UBH0 155 aa14.26□□□□□ -0.13
TSPAN4-205ENST00000397406 ACANP16112 2415 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 A0A0G2JMP0 313 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 A0A0X1KG70 313 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 hCG_1807616A0A1W2PRN6 198 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 SOCS1O15524 211 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 CHRM2P08172 466 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 CD99P14209 185 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 PRKACAP17612 351 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 CPT2P23786 658 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 MNDAP41218 407 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 NR4A2P43354 598 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 PITPNBP48739 271 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 PTH2RP49190 550 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 HOXA4Q00056 320 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 IL18Q14116 193 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 TMEM69Q5SWH9 247 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 RAB12Q6IQ22 244 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 BAIAP2L2Q6UXY1 529 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 GCSAMQ8N6F7 178 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 OR4M2Q8NGB6 313 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms