RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TPPP2P59282 170 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 IQCJQ1A5X6 159 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 C2CD4CQ8TF44 421 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 BRCA1P38398 1863 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 THADAQ6YHU6 1953 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ASPDHA6ND91 283 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 M0R1X1 148 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 MASP2O00187 686 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 MBTPS2O43462 519 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 EPHA8P29322 1005 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 LGALS7P47929 136 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 DHRS2Q13268 280 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 LIMS2Q7Z4I7 341 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR10V1Q8NGI7 309 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 APOBEC4Q8WW27 367 aaKnown RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 DIRC2Q96SL1 478 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 MAGT1Q9H0U3 335 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SERGEFQ9UGK8 458 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SHANK3Q9BYB0 1731 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 C5orf67F2Z3F1 127 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TCTN1Q2MV58 587 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 Q56UQ5 140 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 LINC00596Q86U02 117 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 VASH2Q86V25 355 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 GRAMD2BQ96HH9 432 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZDHHC11Q9H8X9 412 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 LHX9Q9NQ69 397 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 DOCK4Q8N1I0 1966 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 CST7O76096 145 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 PDZD11Q5EBL8 140 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 DHRS13Q6UX07 377 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SLC16A12Q6ZSM3 486 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 RAB1CQ92928 201 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ALG14Q96F25 216 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 PI4KAP42356 2102 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 A0A1W2PPQ1 181 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 HMSDA8MTL9 139 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 RNASEK-C17orf49H0YIS7 233 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 BRS3P32247 399 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 PLAC9Q5JTB6 97 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF547Q8IVP9 402 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ASB10Q8WXI3 467 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 CCL17Q92583 94 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 WBP1LQ9NX94 342 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF107Q9UII5 783 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 COL11A2P13942 1736 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TMPRSS2O15393 492 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 DNPH1O43598 174 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR2J3O76001 311 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 MT-CO3P00414 261 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 RHOBP62745 196 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR5C1Q8NGR4 320 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 MISP3Q96FF7 219 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 NUDT16L1Q9BRJ7 211 aaKnown RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SLC35B3Q9H1N7 401 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR2D2Q9H210 308 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 CNTD2Q9H8S5 307 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SH2D2AQ9NP31 389 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 MANBALQ9NQG1 85 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SLC6A13Q9NSD5 602 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 C20orf141Q9NUB4 165 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 IGHA2P01877 340 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 BMP5P22003 454 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 RPS4Y1P22090 263 aaKnown RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 GNG4P50150 75 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 C17orf47Q8NEP4 570 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 PLA2G2FQ9BZM2 168 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 WDR13Q9H1Z4 485 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 POMT1Q9Y6A1 747 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ADAM20O43506 726 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TOX4O94842 621 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 RBP4P02753 201 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 GALR1P47211 349 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 FOXO1Q12778 655 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 PNRC1Q12796 327 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR4S2Q8NH73 311 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SIRT3Q9NTG7 399 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF230Q9UIE0 474 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 LOC102723971A0A1B0GUV8 181 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SPCS3P61009 180 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 FAM3AP98173 230 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 GUCA2AQ02747 115 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF154Q13106 437 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 CLLU1Q5K131 121 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 DHRS7BQ6IAN0 325 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF425Q6IV72 752 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 FA2HQ7L5A8 372 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 BHLHA9Q7RTU4 235 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 CXorf67Q86X51 503 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR1L1Q8NH94 360 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 VAMP8Q9BV40 100 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SARGQ9BW04 601 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM231Q9H6L2 316 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 LCTP09848 1927 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 SEMG1P04279 462 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 OR5AC1P0C628 307 aa4.85□□□□□ -1.63
VPS13C-204ENST00000395898 ZP3P21754 424 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms