RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 OPN1MWP04001 364 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 ACSM4P0C7M7 580 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 OPN1MW2P0DN77 364 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 OPN1MW3P0DN78 364 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 CPN1P15169 458 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 BRS3P32247 399 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 Q1RN00 199 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF528Q3MIS6 628 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 FNDC7Q5VTL7 733 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF574Q6ZN55 896 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-203ENST00000394872 D2HGDHQ8N465 521 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 ZG16BQ96DA0 208 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 ZDHHC11Q9H8X9 412 aa9.22□□□□□ -0.93
COL4A6-203ENST00000394872 TGOLN2O43493 480 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 AVPR2P30518 371 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 OR2B8PP59922 312 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 SPNS3Q6ZMD2 512 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 LIMS2Q7Z4I7 341 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 ZDHHC22Q8N966 263 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 OR1L4Q8NGR5 311 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 SRRQ9GZT4 340 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 SAP30LQ9HAJ7 183 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 OR2M5A3KFT3 312 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 CCL21O00585 134 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 FOXO1Q12778 655 aa9.21□□□□□ -0.93
COL4A6-203ENST00000394872 SPINK2P20155 84 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.94
COL4A6-203ENST00000394872 PRSS12P56730 875 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
COL4A6-203ENST00000394872 PAX5Q02548 391 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 DHRS7BQ6IAN0 325 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-203ENST00000394872 C11orf87Q6NUJ2 197 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 FA2HQ7L5A8 372 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 MOGAT1Q96PD6 335 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 POMT1Q9Y6A1 747 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 WNT1P04628 370 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 DEGS2Q6QHC5 323 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 HMGCLL1Q8TB92 370 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 RASL11BQ9BPW5 248 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF275Q9NSD4 429 aaPredicted RBP9.21□□□□□ -0.94
COL4A6-203ENST00000394872 EXOGQ9Y2C4 368 aaKnown RBP9.21□□□□□ -0.94
COL4A6-203ENST00000394872 MPC1Q9Y5U8 109 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 MYO5AQ9Y4I1 1855 aaKnown RBP9.21□□□□□ -0.94
COL4A6-203ENST00000394872 A0A1B0GTH9 108 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 LYZP61626 148 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 DOK5Q9P104 306 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 TMED3Q9Y3Q3 217 aa9.21□□□□□ -0.94
COL4A6-203ENST00000394872 TRIM77I1YAP6 450 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 PDCD6O75340 191 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 CTLA4P16410 223 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 CLPPQ16740 277 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-203ENST00000394872 PTP4A1Q93096 173 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 OR1A1Q9P1Q5 309 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 COLQQ9Y215 455 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-203ENST00000394872 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 ALX3O95076 343 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF205O95201 554 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 RAB5AP20339 215 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 KIAA0040Q15053 153 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 OR52L2PQ8NGH6 319 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 SIRT5Q9NXA8 310 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 LOC102723971A0A1B0GUV8 181 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 PGA3P0DJD8 388 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 NAT1P18440 290 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 SLC37A1P57057 533 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 GLDNQ6ZMI3 551 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-203ENST00000394872 EID2BQ96D98 161 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 ARAP2Q8WZ64 1704 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 PLPP2O43688 288 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 PJVKQ0ZLH3 352 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF441Q8N8Z8 693 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 OR8B12Q8NGG6 310 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 PTPMT1Q8WUK0 201 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-203ENST00000394872 NRTNQ99748 197 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 SF3B5Q9BWJ5 86 aaKnown RBP9.2□□□□□ -0.94
COL4A6-203ENST00000394872 CNTD2Q9H8S5 307 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 EML2O95834 649 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 RD3LP0DJH9 198 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 KRTDAPP60985 99 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 MYPOPQ86VE0 399 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-203ENST00000394872 C10orf90Q96M02 699 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 NTMQ9P121 344 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 ZNF716A6NP11 495 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 LANCL1O43813 399 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 ZFPL1O95159 310 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 CCL3P10147 92 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 SLC25A22Q9H936 323 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 UCK1Q9HA47 277 aa9.2□□□□□ -0.94
COL4A6-203ENST00000394872 A0A1W2PQD3 144 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 SP1P08047 785 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 PTHLHP12272 177 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 SLC25A30Q5SVS4 291 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 ASCL5Q7RTU5 278 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 COL18A1P39060 1754 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 CDC20Q12834 499 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 OR1B1Q8NGR6 318 aa9.19□□□□□ -0.94
COL4A6-203ENST00000394872 RAB40CQ96S21 281 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms