RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 NXPH3O95157 252 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 IGHV2-5P01817 119 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 FGF5P12034 268 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 CTSSP25774 331 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
PTBP1-204ENST00000394601 GABREP78334 506 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 IAH1Q2TAA2 248 aaPredicted RBP13.59□□□□□ -0.23
PTBP1-204ENST00000394601 KHDC3LQ587J8 217 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 CARD17Q5XLA6 110 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
PTBP1-204ENST00000394601 PPIHO43447 177 aaKnown RBP13.58□□□□□ -0.24
PTBP1-204ENST00000394601 MPIG6BO95866 241 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 HEXAP06865 529 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 OR3A2P47893 321 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 SP6Q3SY56 376 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 KLHL24Q6TFL4 600 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.24
PTBP1-204ENST00000394601 ZDHHC22Q8N966 263 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 NABP1Q96AH0 204 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 IMMP1LQ96LU5 166 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 PILRBQ9UKJ0 227 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 IGHV1-45A0A0A0MS14 117 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 CDRT15L2A8MXV6 281 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 MFNGO00587 321 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 SOCS1O15524 211 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 KLF7O75840 302 aaPredicted RBP13.58□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF25P17030 456 aaPredicted RBP13.58□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM176BQ3YBM2 270 aaPredicted RBP13.58□□□□□ -0.24
PTBP1-204ENST00000394601 FOXL2NBQ6ZUU3 175 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 DTWD2Q8NBA8 298 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 SUMF2Q8NBJ7 301 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 SH3BGRL3Q9H299 93 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 PRDM13Q9H4Q3 707 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 PCSK5Q92824 1860 aa13.58□□□□□ -0.24
PTBP1-204ENST00000394601 MYO7BQ6PIF6 2116 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 MBP02144 154 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 SFTPDP35247 375 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 APLNRP35414 380 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 PPP1CCP36873 323 aaKnown RBP13.57□□□□□ -0.24
PTBP1-204ENST00000394601 TAS2R60P59551 318 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 UBE2KP61086 200 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 HLA-BQ31612 363 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 PRAMEF20Q5VT98 475 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 LPCAT3Q6P1A2 487 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 Q6ZSR3 168 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 HDGFL3Q9Y3E1 203 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 ESPL1Q14674 2120 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 SPENQ96T58 3664 aaKnown RBP13.57□□□□□ -0.24
PTBP1-204ENST00000394601 CEACAM18A8MTB9 384 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 H0YL77 283 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 CDC14BO60729 498 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 CYC1P08574 325 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM33P57088 247 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 CLEC18BQ6UXF7 455 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 HOGA1Q86XE5 327 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 WDR54Q9H977 334 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 ZIC3O60481 467 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 TDGF1P13385 188 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
PTBP1-204ENST00000394601 CX3CR1P49238 355 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 LSM6P62312 80 aaKnown RBP13.57□□□□□ -0.24
PTBP1-204ENST00000394601 HIST1H3AP68431 136 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 ENDOGQ14249 297 aaKnown RBP13.57□□□□□ -0.24
PTBP1-204ENST00000394601 HIST2H3PS2Q5TEC6 136 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 AWAT2Q6E213 333 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 GLIPR1L1Q6UWM5 242 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 ABHD12BQ7Z5M8 362 aaPredicted RBP13.57□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM54Q969K7 222 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 PLA2G2EQ9NZK7 142 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 IL17BQ9UHF5 180 aa13.57□□□□□ -0.24
PTBP1-204ENST00000394601 COX6A1P12074 109 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 EDN3P14138 238 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 LYSMD4Q5XG99 296 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 C1QL2Q7Z5L3 287 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 ADAMTS17Q8TE56 1095 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF701Q9NV72 531 aaPredicted RBP13.56□□□□□ -0.24
PTBP1-204ENST00000394601 CHD3Q12873 2000 aaKnown RBP13.56□□□□□ -0.24
PTBP1-204ENST00000394601 FCGR3AP08637 254 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 CXCL1P09341 107 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
PTBP1-204ENST00000394601 ANKRD55Q3KP44 614 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 C10orf128Q5T292 105 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 FAHD2BQ6P2I3 314 aaPredicted RBP13.56□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 FAM89BQ8N5H3 189 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 NECAP1Q8NC96 275 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 TOMM40LQ969M1 308 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 TMEM230Q96A57 120 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 FAHD2AQ96GK7 314 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 OPA3Q9H6K4 179 aa13.56□□□□□ -0.24
PTBP1-204ENST00000394601 DIDO1Q9BTC0 2240 aaKnown RBP13.56□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF587BE7ETH6 402 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 RPS23P62266 143 aaKnown RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 PMS2CLQ68D20 193 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 RPUSD3Q6P087 351 aaKnown RBP13.55□□□□□ -0.24
PTBP1-204ENST00000394601 ZNF610Q8N9Z0 462 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 HLA-CQ95604 372 aa13.55□□□□□ -0.24
PTBP1-204ENST00000394601 GPER1Q99527 375 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms