RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GAMTQ14353 236 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 SLC25A26Q70HW3 274 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 MSL2Q9HCI7 577 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 PSENENQ9NZ42 101 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 HEATR5BQ9P2D3 2071 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 IGHV3-64DA0A0J9YX35 117 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 SEC11BP0C7V7 166 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 TCN2P20062 427 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 PPP1CCP36873 323 aaKnown RBP12.6□□□□□ -0.39
RTF1-201ENST00000389629 ZNF343Q6P1L6 599 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 OR6C1Q96RD1 312 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 GFI1Q99684 422 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 RARRES2Q99969 163 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 LRRC61Q9BV99 259 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 TREM2Q9NZC2 230 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 TMED3Q9Y3Q3 217 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 IGKV1D-42A0A075B6H8 117 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 TRAV34A0A0B4J273 112 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 GJE1A6NN92 205 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 HSBP1L1C9JCN9 74 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 CTSBP07858 339 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 MYBPHQ13203 477 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 ETFRF1Q6IPR1 90 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 SSX7Q7RTT5 188 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 AAED1Q7RTV5 226 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 OR1N1Q8NGS0 311 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 HDHD3Q9BSH5 251 aaPredicted RBP12.6□□□□□ -0.39
RTF1-201ENST00000389629 AUP1Q9Y679 476 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 ANKRD30BLA7E2S9 258 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 NRASP01111 189 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
RTF1-201ENST00000389629 FZD2Q14332 565 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 HOGA1Q86XE5 327 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 OR10J5Q8NHC4 309 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 GPBAR1Q8TDU6 330 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 MCHR2Q969V1 340 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 PECRQ9BY49 303 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 SYNGR4O95473 234 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 SMIM10L1P0DMW3 83 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 DYNLT3P51808 116 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
RTF1-201ENST00000389629 RAB30Q15771 203 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 NTNG2Q96CW9 530 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 SMIM10Q96HG1 83 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
RTF1-201ENST00000389629 ATP6V0CP27449 155 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 RAB31Q13636 194 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 ZNF658BQ4V348 819 aaPredicted RBP12.59□□□□□ -0.39
RTF1-201ENST00000389629 NOXO1Q8NFA2 376 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 OR2AE1Q8NHA4 323 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 GPR132Q9UNW8 380 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 PTRH2Q9Y3E5 179 aaKnown RBP12.59□□□□□ -0.39
RTF1-201ENST00000389629 TRAPPC1Q9Y5R8 145 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 PRR32B1ATL7 298 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 HKR1P10072 659 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 PRF1P14222 555 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 P2RY4P51582 365 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 TMEM241Q24JQ0 296 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 FAM58AQ8N1B3 248 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 OR8B12Q8NGG6 310 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 UBALD1Q8TB05 177 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 UBE2L5PA0A1B0GUS4 154 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 LINC01565O15544 149 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 FOXS1O43638 330 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 CTSDP07339 412 aaPredicted RBP12.59□□□□□ -0.39
RTF1-201ENST00000389629 RUNX1Q01196 453 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 TFF2Q03403 129 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 NKAIN1Q4KMZ8 207 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 PPP1R3BQ86XI6 285 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 UHRF2Q96PU4 802 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 COA4Q9NYJ1 87 aa12.59□□□□□ -0.39
RTF1-201ENST00000389629 MT-CO2P00403 227 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 FBP1P09467 338 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 APCDD1LQ8NCL9 501 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 OR10A7Q8NGE5 316 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 OR13G1Q8NGZ3 307 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 CTHRC1Q96CG8 243 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 AQP10Q96PS8 301 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 C5orf66Q9H5L9 145 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 ANXA10Q9UJ72 324 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 KIR2DS1A0A191URI9 304 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 ANKUB1A6NFN9 424 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 C17orf112F2Z3M2 114 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 K7EQS6 105 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 KIR2DS4P43632 304 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 FAM3AP98173 230 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
RTF1-201ENST00000389629 CLN3Q13286 438 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 ZNF813Q6ZN06 617 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 OSR2Q8N2R0 312 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 FGF11Q92914 225 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 VAMP8Q9BV40 100 aa12.58□□□□□ -0.4
RTF1-201ENST00000389629 FAM234AQ9H0X4 552 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms