RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 UBA3Q8TBC4 463 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 FAM57AQ8TBR7 257 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 NELFBQ8WX92 580 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 SPACA5Q96QH8 159 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 MS4A8Q9BY19 250 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 TMBIM4Q9HC24 238 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 DAZ1Q9NQZ3 744 aaKnown RBP3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 DIABLOQ9NR28 239 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 ZNF780BQ9Y6R6 833 aa3.04□□□□□ -1.92
RNU6-40P-201ENST00000384254 OR2AT4A6NND4 320 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 CLDN34H7C241 214 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 SLC37A4O43826 429 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 CNMDO75829 334 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 IGKV1D-16P01601 117 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 CD8AP01732 235 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 SEC11BP0C7V7 166 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 HLA-DMAP28067 261 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 IL12BP29460 328 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 TUFMP49411 452 aaKnown RBP3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 BNIP2Q12982 314 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 ELOCQ15369 112 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 USF2Q15853 346 aaPredicted RBP3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 PSG3Q16557 428 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 UBE2NLQ5JXB2 153 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 FAM104BQ5XKR9 115 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 HBMQ6B0K9 141 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 NT5DC3Q86UY8 548 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 SGPP2Q8IWX5 399 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 CLHC1Q8NHS4 586 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 SRRQ9GZT4 340 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 NXF2Q9GZY0 626 aaKnown RBP3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 LINC00574Q9H8X3 128 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 SND1-IT1Q9HBX3 110 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 INIPQ9NRY2 104 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 MARCOQ9UEW3 520 aaPredicted RBP3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 CLEC2DQ9UHP7 191 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 TICRRQ7Z2Z1 1910 aa3.03□□□□□ -1.92
RNU6-40P-201ENST00000384254 SCN4AP35499 1836 aa3.03□□□□□ -1.93
RNU6-40P-201ENST00000384254 KIR2DS1A0A191URI9 304 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 LOC389332A0A1B0GUA5 103 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 GOLGA6L4A6NEF3 574 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 K7EM74 188 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 UPK1AO00322 258 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 CST4P01036 141 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 SLC6A1P30531 599 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 LCN1P31025 176 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 RPA3P35244 121 aaPredicted RBP3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 TGM4P49221 684 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 TTPAP49638 278 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 RAB38P57729 211 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 SP6Q3SY56 376 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 CLEC12AQ5QGZ9 265 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 PRR9Q5T870 116 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 C16orf47Q6ZP98 133 aaPredicted RBP3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 GAPTQ8N292 157 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 YIPF5Q969M3 257 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 CATSPER2Q96P56 530 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 APOL4Q9BPW4 351 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 SEC22CQ9BRL7 303 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 PLEKHA1Q9HB21 404 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 RDH14Q9HBH5 336 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 OR2S2Q9NQN1 319 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 TAC3Q9UHF0 121 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 SLC22A14Q9Y267 594 aa3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 SETD1AO15047 1707 aaKnown RBP3.02□□□□□ -1.93
RNU6-40P-201ENST00000384254 IGKV1D-17A0A075B6S4 117 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 GOLGA8QA0A0J9YX86 632 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 UBDO15205 165 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 IGKV1-17P01599 117 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 SPAM1P38567 509 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 KCNJ3P48549 501 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 RBX1P62877 108 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 STX3Q13277 289 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 ANGPT1Q15389 498 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 TRIP13Q15645 432 aaPredicted RBP3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 SSX1Q16384 188 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF404Q494X3 552 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 ACTBL2Q562R1 376 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 FAM131AQ6UXB0 335 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 FA2HQ7L5A8 372 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 SYCE1Q8N0S2 351 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF680Q8NEM1 530 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 OR4K17Q8NGC6 315 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 BLNKQ8WV28 456 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 PPP1R36Q96LQ0 422 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF396Q96N95 335 aaPredicted RBP3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 YPEL4Q96NS1 127 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 THTPAQ9BU02 230 aa3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 NXT1Q9UKK6 140 aaKnown RBP3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 KLF13Q9Y2Y9 288 aaPredicted RBP3.01□□□□□ -1.93
RNU6-40P-201ENST00000384254 TRIP11Q15643 1979 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 ERICH4A6NGS2 130 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 CD300LBA8K4G0 201 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 PLPP3O14495 311 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 COX7A2P2O60397 106 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 NEMFO60524 1076 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 LDOC1O95751 146 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms