RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 MRPS28Q9Y2Q9 187 aaKnown RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 CACNA1IQ9P0X4 2223 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 SERPINA7P05543 415 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 VSIG8P0DPA2 414 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 SNU13P55769 128 aaKnown RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 CSNK1G2P78368 415 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 FOXF1Q12946 379 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 EXOSC7Q15024 291 aaKnown RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 CMTM2Q8TAZ6 248 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 SMIM7Q9BQ49 75 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 HSPB9Q9BQS6 159 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 SDF2L1Q9HCN8 221 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 AURKAIP1Q9NWT8 199 aaPredicted RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 MAP1LC3B2A6NCE7 125 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 CST7O76096 145 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF205O95201 554 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 RENP00797 406 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 PPBPP02775 128 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 DMWDQ09019 674 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF266Q14584 549 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 EMG1Q92979 244 aaKnown RBP13.21□□□□□ -0.29
VLDLR-202ENST00000382099 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF665Q9H7R5 613 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 LAMTOR2Q9Y2Q5 125 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ARPC3O15145 178 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF217O75362 1048 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ONECUT2O95948 504 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 DTYMKP23919 212 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 FAM3BP58499 235 aaPredicted RBP13.21□□□□□ -0.29
VLDLR-202ENST00000382099 UBE2G2P60604 165 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 HSF1Q00613 529 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 MFSD9Q8NBP5 474 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 FAM103A1Q9BTL3 118 aaKnown RBP13.21□□□□□ -0.29
VLDLR-202ENST00000382099 LMF2Q9BU23 707 aaKnown RBP13.21□□□□□ -0.29
VLDLR-202ENST00000382099 SAMD10Q9BYL1 202 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.29
VLDLR-202ENST00000382099 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.29
VLDLR-202ENST00000382099 ANAPC1Q9H1A4 1944 aa13.21□□□□□ -0.3
VLDLR-202ENST00000382099 KIF26BQ2KJY2 2108 aa13.21□□□□□ -0.3
VLDLR-202ENST00000382099 LOC107986453A0A1B0GWG9 222 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 P2RY10O00398 339 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 ACRP10323 421 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 CDKN1AP38936 164 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 KRTDAPP60985 99 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
VLDLR-202ENST00000382099 TSPO2Q5TGU0 170 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
VLDLR-202ENST00000382099 MOB3AQ96BX8 217 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 RBMXL1Q96E39 390 aaKnown RBP13.2□□□□□ -0.3
VLDLR-202ENST00000382099 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 CALHM2Q9HA72 323 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 TMEM242Q9NWH2 141 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 C11orf98E9PRG8 122 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 K7ESM1 405 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 ST8SIA3O43173 380 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 HBE1P02100 147 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF43P17038 809 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 BMI1P35226 326 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 BCL6P41182 706 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 GPR1P46091 355 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 MRPL49Q13405 166 aaKnown RBP13.2□□□□□ -0.3
VLDLR-202ENST00000382099 ABHD17CQ6PCB6 329 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 LGI3Q8N145 548 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 OR5L1Q8NGL2 311 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 CYB5D2Q8WUJ1 264 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF764Q96H86 408 aaPredicted RBP13.2□□□□□ -0.3
VLDLR-202ENST00000382099 LOXL4Q96JB6 756 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 OR6C3Q9NZP0 311 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 A0A0U1RQV5 110 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 CLEC3AO75596 197 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 DBHP09172 617 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 SFTPDP35247 375 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 OR52M1Q8NGK5 317 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 CCL26Q9Y258 94 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 TRAPPC1Q9Y5R8 145 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 VPS13AQ96RL7 3174 aa13.2□□□□□ -0.3
VLDLR-202ENST00000382099 NXPH3O95157 252 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 HPNP05981 417 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 OCIAD2Q56VL3 154 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 OR2T10Q8NGZ9 312 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 HLA-HP01893 362 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
VLDLR-202ENST00000382099 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
VLDLR-202ENST00000382099 FKBP1BP68106 108 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 GATSQ8NAP1 163 aa13.19□□□□□ -0.3
VLDLR-202ENST00000382099 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms