RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 CXXC4Q9H2H0 198 aa13.2□□□□□ -0.3
SNPH-202ENST00000381873 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
SNPH-202ENST00000381873 UQCC1Q9NVA1 299 aa13.2□□□□□ -0.3
SNPH-202ENST00000381873 OR5V1Q9UGF6 321 aa13.2□□□□□ -0.3
SNPH-202ENST00000381873 AKAP6Q13023 2319 aa13.2□□□□□ -0.3
SNPH-202ENST00000381873 TRIP12Q14669 1992 aaPredicted RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 TCRBV16S1A1N1A0A5B0 115 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 OR5H1A6NKK0 313 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 CRYBB2P43320 205 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 MAGEA5P43359 124 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 PRRX1P54821 245 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 OR5I1Q13606 314 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ZNF680Q8NEM1 530 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ST8SIA2Q92186 375 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 CABLES2Q9BTV7 478 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 COX7A1P24310 79 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 CD96P40200 585 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 CNN1P51911 297 aaKnown RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 ETFDHQ16134 617 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 PRR27Q6MZM9 219 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ZNF574Q6ZN55 896 aaPredicted RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 C17orf47Q8NEP4 570 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ZNF230Q9UIE0 474 aaPredicted RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 TMEM272A0A1B0GTI8 110 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 AKR7A2O43488 359 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 Q3ZCU0 254 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 DCAF10Q5QP82 559 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 TUSC5Q8IXB3 177 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 PIK3IP1Q96FE7 263 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 NKX6-2Q9C056 277 aaPredicted RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 OR51I2Q9H344 312 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 AMDHD2Q9Y303 409 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 DOPEY2Q9Y3R5 2298 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 SEC14L6B5MCN3 397 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 S100A4P26447 101 aaKnown RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 LPAR6P43657 344 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
SNPH-202ENST00000381873 WDR54Q9H977 334 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 SLC35D1Q9NTN3 355 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 FLRT3Q9NZU0 649 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 THYN1Q9P016 225 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 ICAM5Q9UMF0 924 aa13.19□□□□□ -0.3
SNPH-202ENST00000381873 TRAV38-1A0A0B4J264 116 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 ADAM10O14672 748 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 GOSR1O95249 250 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 CCL3P10147 92 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
SNPH-202ENST00000381873 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 OR13D1Q8NGV5 346 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 GREM1O60565 184 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 HNF1AP20823 631 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 OR3A1P47881 315 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 DGAT2L6Q6ZPD8 337 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 SLC16A12Q6ZSM3 486 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 UBE2L5PA0A1B0GUS4 154 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 BCL2L11O43521 198 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 CTAG2O75638 210 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 RBP4P02753 201 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
SNPH-202ENST00000381873 PLAC9Q5JTB6 97 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 PTP4A1Q93096 173 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 RAB40CQ96S21 281 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 A0A1W2PPV9 198 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 ADRB1P08588 477 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 NTF3P20783 257 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 INSL4Q14641 139 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
SNPH-202ENST00000381873 RIF1Q5UIP0 2472 aaKnown RBP13.17□□□□□ -0.3
SNPH-202ENST00000381873 S100A8P05109 93 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 NEIL1Q96FI4 390 aaPredicted RBP13.17□□□□□ -0.3
SNPH-202ENST00000381873 LRFN3Q9BTN0 628 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 CNTD2Q9H8S5 307 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 TRIM77I1YAP6 450 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 IGHV4-34P06331 123 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 PNLIPP16233 465 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 ZNF17P17021 662 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 OR3A4PP47883 348 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 Q56UQ5 140 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 PMS2CLQ68D20 193 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 C11orf87Q6NUJ2 197 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 BHLHA15Q7RTS1 189 aaPredicted RBP13.17□□□□□ -0.3
SNPH-202ENST00000381873 MRGPRDQ8TDS7 321 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
SNPH-202ENST00000381873 SEBOXQ9HB31 216 aaPredicted RBP13.17□□□□□ -0.3
SNPH-202ENST00000381873 TRIP11Q15643 1979 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 RFPL4AA6NLU0 287 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 RFPL4AL1F8VTS6 287 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 MPGP29372 298 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
SNPH-202ENST00000381873 SSX1Q16384 188 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 NCR3LG1Q68D85 454 aa13.17□□□□□ -0.3
SNPH-202ENST00000381873 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms