RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CLEC18BQ6UXF7 455 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 GLRX5Q86SX6 157 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 PEG10Q86TG7 708 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 TMEM185AQ8NFB2 350 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 OR5AP2Q8NGF4 316 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 OR6K3Q8NGY3 331 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 PIGCQ92535 297 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 BORCS8Q96FH0 119 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 PRRG4Q9BZD6 226 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 SCO1O75880 301 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SNAPC5O75971 98 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 HLA-HP01893 362 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SERPINA5P05154 406 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CCNOP22674 350 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 PCBD1P61457 104 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 ANKRD55Q3KP44 614 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 ACTBL2Q562R1 376 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 PDSS1Q5T2R2 415 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 RGS7BPQ6MZT1 257 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 TMEM65Q6PI78 240 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 STX12Q86Y82 276 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 ZSCAN4Q8NAM6 433 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 RELL2Q8NC24 303 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 BHLHE23Q8NDY6 225 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CCDC54Q8NEL0 328 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 EMG1Q92979 244 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 REG4Q9BYZ8 158 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 METTL9Q9H1A3 318 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 PPA2Q9H2U2 334 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 LIME1Q9H400 295 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 COMMD9Q9P000 198 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 KIF25Q9UIL4 384 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CBY1Q9Y3M2 126 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 LIPGQ9Y5X9 500 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 EP300Q09472 2414 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SHANK1Q9Y566 2161 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 C5orf51A6NDU8 294 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 GEMIN2O14893 280 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SLC25A4P12235 298 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 FPR2P25090 351 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CALCRP30988 508 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 OPRM1P35372 400 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 MEOX1P50221 254 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 PLGLB1Q02325 96 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 FGL1Q08830 312 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SPEM2Q0P670 501 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 AIMP2Q13155 320 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CNN3Q15417 329 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 OR8B8Q15620 311 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CHRFAM7AQ494W8 412 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 FAM209BQ5JX69 171 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 MOB3CQ70IA8 216 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 CALHM1Q8IU99 346 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 VRK1Q99986 396 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 SULT4A1Q9BR01 284 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 B4GALT7Q9UBV7 327 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 MED12LQ86YW9 2145 aa6.89□□□□□ -1.31
PDLIM5-204ENST00000380176 ESPL1Q14674 2120 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 FARS2O95363 451 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 SFT2D2O95562 160 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 SP1P08047 785 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF806P0C7X5 589 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 AGTR1P30556 359 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 TAS2R31P59538 309 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 TAS2R46P59540 309 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 FAM74A1Q5RGS3 127 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 PLCXD3Q63HM9 321 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ASCL4Q6XD76 172 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 NUFIP2Q7Z417 695 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 KCNRGQ8N5I3 272 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 IL22RA1Q8N6P7 574 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF75AQ96N20 296 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 C1QTNF5Q9BXJ0 243 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 TMEM9BQ9NQ34 198 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ABI3Q9P2A4 366 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF850A8MQ14 1090 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 CRHP06850 196 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 FBXL14Q8N1E6 418 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 MDS2Q8NDY4 140 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 OR10AD1Q8NGE0 317 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 OR5M9Q8NGP3 310 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ST8SIA2Q92186 375 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 RBPMSQ93062 196 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 RNF126Q9BV68 326 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 NARFLQ9H6Q4 476 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF629Q9UEG4 869 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 GPR160Q9UJ42 338 aa6.88□□□□□ -1.31
PDLIM5-204ENST00000380176 A0A0D9SG52 128 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 hCG_1807616A0A1W2PRN6 198 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
PDLIM5-204ENST00000380176 TUBAL3A6NHL2 446 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms