RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TOLLIPQ9H0E2 274 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 TRBV23-1A0A0A0MS06 115 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 POU2F2P09086 479 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 EIF2S3P41091 472 aaKnown RBP10.01□□□□□ -0.81
SMAD9-202ENST00000379826 TMEM267Q0VDI3 215 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF813Q6ZN06 617 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 THNSL2Q86YJ6 484 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 SAT2Q96F10 170 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-202ENST00000379826 SDSLQ96GA7 329 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 LANCL2Q9NS86 450 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 RCC2Q9P258 522 aaKnown RBP10.01□□□□□ -0.81
SMAD9-202ENST00000379826 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 TLE1Q04724 770 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF429Q86V71 674 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 FBXL14Q8N1E6 418 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF611Q8N823 705 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF735P0CB33 412 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 C1orf100Q5SVJ3 147 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 OSR2Q8N2R0 312 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 ALKBH3Q96Q83 286 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-202ENST00000379826 NAA60Q9H7X0 242 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 GPR132Q9UNW8 380 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 DENND4CQ5VZ89 1909 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 TSPAN2O60636 221 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 AADACP22760 399 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 LHFPL2Q6ZUX7 228 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 LFNGQ8NES3 379 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 PSMF1Q92530 271 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 GNRHR2Q96P88 292 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
SMAD9-202ENST00000379826 MT-ND4LP03901 98 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 FHITP49789 147 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 SULT1A1P50225 295 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 P2RY4P51582 365 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF774Q6NX45 483 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 PTX4Q96A99 478 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 GHRLQ9UBU3 117 aa10.01□□□□□ -0.81
SMAD9-202ENST00000379826 A0A096LPE4 126 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 A0A1W2PPZ6 126 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 CEBPZOSA8MTT3 80 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 MFNGO00587 321 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 ADAM20O43506 726 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 CALCRP30988 508 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 OR6S1Q8NH40 331 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 FRZBQ92765 325 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 RBMXL1Q96E39 390 aaKnown RBP10□□□□□ -0.81
SMAD9-202ENST00000379826 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 MIOXQ9UGB7 285 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 PPP1R3CQ9UQK1 317 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 RAB5AP20339 215 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 GALNSP34059 522 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 MMP16P51512 607 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 NHLH2Q02577 135 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 PIGYQ3MUY2 71 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 RNF212Q495C1 297 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 C9orf152Q5JTZ5 239 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 OR8G2PQ6IF36 304 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 HPSE2Q8WWQ2 592 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 SH3BGRL3Q9H299 93 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 CALHM2Q9HA72 323 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 SLCO1B1Q9Y6L6 691 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 ALPK3Q96L96 1907 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 IGHV1OR21-1A0A087WYE8 117 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 A0A1B0GTI1 187 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF727A8MUV8 499 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 GEMIN2O14893 280 aaKnown RBP10□□□□□ -0.81
SMAD9-202ENST00000379826 LY86O95711 162 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 ISG15P05161 165 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 PLAC9Q5JTB6 97 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 SLC25A26Q70HW3 274 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 OR10D4PQ8NGN7 298 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 CCDC74BQ96LY2 380 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 KCNK17Q96T54 332 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 EIF1BO60739 113 aaKnown RBP10□□□□□ -0.81
SMAD9-202ENST00000379826 FABP4P15090 132 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 DHRS7BQ6IAN0 325 aaPredicted RBP10□□□□□ -0.81
SMAD9-202ENST00000379826 OR2T2Q6IF00 324 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 PARP11Q9NR21 331 aa10□□□□□ -0.81
SMAD9-202ENST00000379826 DHHO43323 396 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 YIF1AO95070 293 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
SMAD9-202ENST00000379826 MKXQ8IYA7 352 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 OR11L1Q8NGX0 322 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 OR14J1Q9UGF5 321 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 MCTS1Q9ULC4 181 aaKnown RBP9.99□□□□□ -0.81
SMAD9-202ENST00000379826 LIPGQ9Y5X9 500 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 COL4A3Q01955 1670 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 FAM90A27PA6NNH2 459 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 HLA-HP01893 362 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 POLR2GP62487 172 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMAD9-202ENST00000379826 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 C1orf87Q8N0U7 546 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 OR5C1Q8NGR4 320 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 OR1J1Q8NGS3 322 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 SLC25A43Q8WUT9 341 aaPredicted RBP9.99□□□□□ -0.81
SMAD9-202ENST00000379826 SSX3Q99909 188 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 PRO1933Q9H354 126 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 CRLF2Q9HC73 371 aa9.99□□□□□ -0.81
SMAD9-202ENST00000379826 ANKRD30BLA7E2S9 258 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms