RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 IL19Q9UHD0 177 aa20.83■□□□□ 0.93
ECHDC3-201ENST00000379215 TMEM235A6NFC5 223 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 B9A039 149 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 H7C417 338 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 M0R233 179 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 MFNGO00587 321 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 SPRY3O43610 288 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 CA11O75493 328 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 GATA4P43694 442 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 TAF9Q16594 264 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 ZNF672Q499Z4 452 aaPredicted RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 POC1AQ8NBT0 407 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 CHPT1Q8WUD6 406 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 EMG1Q92979 244 aaKnown RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 ERGIC1Q969X5 290 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 MEGF10Q96KG7 1140 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 NRIP2Q9BQI9 281 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 C7orf50Q9BRJ6 194 aaKnown RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 FN3KRPQ9HA64 309 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 SPACA1Q9HBV2 294 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 MTFP1Q9UDX5 166 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 FBXO9Q9UK97 447 aaPredicted RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 TBC1D24Q9ULP9 559 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 CADP27708 2225 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 HCFC1P51610 2035 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 CENPXA8MT69 81 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 VGLL3A8MV65 326 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 SIAH2O43255 324 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 RHBDL1O75783 438 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 GNB3P16520 340 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 LOXP28300 417 aaPredicted RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 GNG2P59768 71 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 PIGYQ3MUY2 71 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 RNASE12Q5GAN4 147 aaKnown RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 PLAC9Q5JTB6 97 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 MZT2BQ6NZ67 158 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 OR10Z1Q8NGY1 313 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 GCDHQ92947 438 aaPredicted RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 ARHGAP5-AS1Q96IT6 56 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 COX4I2Q96KJ9 171 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 OR2V2Q96R30 315 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 PLEKHJ1Q9NW61 149 aa20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 CISD1Q9NZ45 108 aaKnown RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 ZNF107Q9UII5 783 aaPredicted RBP20.82■□□□□ 0.92
ECHDC3-201ENST00000379215 ANKHD1Q8IWZ3 2542 aaKnown RBP20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 GEMIN2O14893 280 aaKnown RBP20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 ORC5O43913 435 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 GOSR1O95249 250 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 IGHV1-46P01743 117 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 CD55P08174 381 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 CSF1P09603 554 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 PRKACAP17612 351 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 IGFBP2P18065 325 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 TMEM50BP56557 158 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 ERVK11-1P61568 191 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 TNFAIP6P98066 277 aaPredicted RBP20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 DYRK1AQ13627 763 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 TRIM16LQ309B1 348 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 SEH1LQ96EE3 360 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 PECRQ9BY49 303 aa20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 ZMAT3Q9HA38 289 aaKnown RBP20.81■□□□□ 0.92
ECHDC3-201ENST00000379215 C17orf100A8MU93 164 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 LANCL1O43813 399 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 PDCD6O75340 191 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 PTHLHP12272 177 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 CFHR2P36980 270 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 PMELP40967 661 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 CBX5P45973 191 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 FAM209AQ5JX71 171 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 PRAMEF6Q5VXH4 476 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 GTF3AQ92664 365 aaKnown RBP20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 MS4A5Q9H3V2 200 aa20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 KLF2Q9Y5W3 355 aaPredicted RBP20.8■□□□□ 0.92
ECHDC3-201ENST00000379215 MEIOCA2RUB1 952 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 WIPF3A6NGB9 483 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 NXPH2O95156 264 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 TNFRSF1AP19438 455 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 OXA1LQ15070 435 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 TESK1Q15569 626 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 SPIN3Q5JUX0 258 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 WDR82Q6UXN9 313 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 C11orf53Q8IXP5 236 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 ST8SIA4Q92187 359 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 RASL12Q9NYN1 266 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 PLEKHA6Q9Y2H5 1048 aa20.79■□□□□ 0.92
ECHDC3-201ENST00000379215 hCG_1807616A0A1W2PRN6 198 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 OR7C1O76099 320 aaPredicted RBP20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 FUT3P21217 361 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 CHATP28329 748 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 ARFRP1Q13795 201 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 PCGF3Q3KNV8 242 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 NKAPLQ5M9Q1 402 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 HS3ST6Q96QI5 342 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 EGLN1Q9GZT9 426 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 IFT22Q9H7X7 185 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 HES4Q9HCC6 221 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 DYNLRB1Q9NP97 96 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 C1orf123Q9NWV4 160 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 KLK11Q9UBX7 282 aa20.78■□□□□ 0.92
ECHDC3-201ENST00000379215 GLS2Q9UI32 602 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms