RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZNF260Q3ZCT1 412 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 FAM74A3Q4VXF1 159 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 SHEQ5VZ18 495 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 LPCAT3Q6P1A2 487 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 SLC25A42Q86VD7 318 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 BOLLQ8N9W6 283 aaKnown RBP16.77■□□□□ 0.28
SSU72-204ENST00000378726 NANOS1Q8WY41 292 aaKnown RBP16.77■□□□□ 0.28
SSU72-204ENST00000378726 AQP3Q92482 292 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 CST11Q9H112 138 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 DNTTIP1Q9H147 329 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 DKK4Q9UBT3 224 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 GHRLQ9UBU3 117 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 PLEKHA6Q9Y2H5 1048 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 A0A1B0GW55 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 PCP4L1A6NKN8 68 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 SCGNO76038 276 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4L2P0CJ85 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4L3P0CJ86 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4L4P0CJ87 422 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4L5P0CJ88 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4L6P0CJ89 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4L7P0CJ90 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 ALDH3B1P43353 468 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 TMEM42Q69YG0 159 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 OR2A2Q6IF42 318 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 OR52W1Q6IF63 320 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 TRAPPC6BQ86SZ2 158 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 OR10R2Q8NGX6 335 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 APOBEC3DQ96AK3 386 aaPredicted RBP16.77■□□□□ 0.27
SSU72-204ENST00000378726 SPSB1Q96BD6 273 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 S100A13Q99584 98 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 NICN1Q9BSH3 213 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 TMEM59Q9BXS4 323 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 SELENOIQ9C0D9 397 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 DUX4Q9UBX2 424 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 ZNF107Q9UII5 783 aaPredicted RBP16.77■□□□□ 0.27
SSU72-204ENST00000378726 DMXL2Q8TDJ6 3036 aa16.77■□□□□ 0.27
SSU72-204ENST00000378726 ACACAQ13085 2346 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 FAM230AA0A1W2PPH8 454 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 FAM25EA8MYX2 175 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 APLNRP35414 380 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 FOXF2Q12947 444 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 CNN3Q15417 329 aaKnown RBP16.76■□□□□ 0.27
SSU72-204ENST00000378726 MYO7BQ6PIF6 2116 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 LYG2Q86SG7 212 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 MDP1Q86V88 176 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 PIGCQ92535 297 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 CEP295Q9C0D2 2601 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 KCNAB3O43448 404 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 NGFP01138 241 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 CRYABP02511 175 aaKnown RBP16.76■□□□□ 0.27
SSU72-204ENST00000378726 MEF2DQ14814 521 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 RNASE10Q5GAN6 216 aaKnown RBP16.76■□□□□ 0.27
SSU72-204ENST00000378726 NSUN5P2Q63ZY6 315 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 VWA1Q6PCB0 445 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 Q6ZT83 130 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 ACOT7LQ6ZUV0 252 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 CLRN3Q8NCR9 226 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 REPIN1Q9BWE0 567 aaKnown RBP16.76■□□□□ 0.27
SSU72-204ENST00000378726 STARD10Q9Y365 291 aa16.76■□□□□ 0.27
SSU72-204ENST00000378726 SVILO95425 2214 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 A0A0A6YYD4 124 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 C9orf170A2RU37 121 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 RAD51DO75771 328 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 LYZL6O75951 148 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 MALLQ13021 153 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 RTN4RL2Q86UN3 420 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 TMEM185AQ8NFB2 350 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 PRRT1Q99946 306 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 URM1Q9BTM9 101 aaKnown RBP16.75■□□□□ 0.27
SSU72-204ENST00000378726 ELL3Q9HB65 397 aaPredicted RBP16.75■□□□□ 0.27
SSU72-204ENST00000378726 SLC2A8Q9NY64 477 aa16.75■□□□□ 0.27
SSU72-204ENST00000378726 ZNF816-ZNF321PA0A0X1KG74 233 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 SERPINA5P05154 406 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 GNB3P16520 340 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 RBP2P50120 134 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 FAM189A2Q15884 450 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 TMEM17Q86X19 198 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 ADAD2Q8NCV1 583 aaKnown RBP16.74■□□□□ 0.27
SSU72-204ENST00000378726 NUDCD2Q8WVJ2 157 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 BORCS8Q96FH0 119 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 NUDT16L1Q9BRJ7 211 aaKnown RBP16.74■□□□□ 0.27
SSU72-204ENST00000378726 ABCD4O14678 606 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 SOCS1O15524 211 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
SSU72-204ENST00000378726 IL2RAP01589 272 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 TMEM225BP0DP42 221 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 HLA-GP17693 338 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 FLI1Q01543 452 aaPredicted RBP16.74■□□□□ 0.27
SSU72-204ENST00000378726 OR5T2Q8NGG2 359 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 MITD1Q8WV92 249 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 NARS2Q96I59 477 aaKnown RBP16.74■□□□□ 0.27
SSU72-204ENST00000378726 SLC7A11Q9UPY5 501 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 PRELID3BQ9Y3B1 194 aa16.74■□□□□ 0.27
SSU72-204ENST00000378726 ANKRD11Q6UB99 2663 aaPredicted RBP16.74■□□□□ 0.27
SSU72-204ENST00000378726 IGKV1-27A0A075B6S5 117 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 A0A1W2PR80 420 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 SERPINA2P20848 420 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 TMEM50BP56557 158 aa16.73■□□□□ 0.27
SSU72-204ENST00000378726 UBE2NP61088 152 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms