RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CNN3Q15417 329 aaKnown RBP11.5□□□□□ -0.57
PRPF18-202ENST00000378572 UBE2V2Q15819 145 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 IDNKQ5T6J7 187 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 HAVCR1Q96D42 359 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 OR2V2Q96R30 315 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 UQCC2Q9BRT2 126 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 C6orf62Q9GZU0 229 aaPredicted RBP11.5□□□□□ -0.57
PRPF18-202ENST00000378572 PATZ1Q9HBE1 687 aaKnown RBP11.5□□□□□ -0.57
PRPF18-202ENST00000378572 MMP26Q9NRE1 261 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
PRPF18-202ENST00000378572 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 GMDSO60547 372 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 NRASP01111 189 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 CALCBP10092 127 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 KITLGP21583 273 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 PRKACBP22694 351 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 BMXP51813 675 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 CAPZA1P52907 286 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 ZNF154Q13106 437 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 BAMBIQ13145 260 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 ZMYND11Q15326 602 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 TMEM155Q4W5P6 130 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 DNAAF1Q8NEP3 725 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 OR10AD1Q8NGE0 317 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 OR6M1Q8NGM8 313 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 CPNE2Q96FN4 548 aaPredicted RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 CMTM3Q96MX0 182 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 WDFY2Q96P53 400 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 ABCB9Q9NP78 766 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 MRPL15Q9P015 296 aaKnown RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 MPC1Q9Y5U8 109 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 IGHV3OR16-10A0A075B7F0 116 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 IGHV3-64DA0A0J9YX35 117 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 DNAJC9-AS1A6NH13 148 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 MAGEB3O15480 346 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 ZNF205O95201 554 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 FSHBP01225 129 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 EGR1P18146 543 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 AZGP1P25311 298 aaKnown RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 S100A5P33763 92 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 MDH2P40926 338 aaKnown RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 FOXL1Q12952 345 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 Q6ZR03 302 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 MUC20Q8N307 709 aaPredicted RBP11.49□□□□□ -0.57
PRPF18-202ENST00000378572 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 IL19Q9UHD0 177 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 STEAP1Q9UHE8 339 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 RHBDD3Q9Y3P4 386 aa11.49□□□□□ -0.57
PRPF18-202ENST00000378572 PPIAL4EA0A075B759 164 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 ANKRD30BLA7E2S9 258 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 PPIAL4DF5H284 164 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 CTDSP2O14595 271 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 HCKP08631 526 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 OCMP0CE72 109 aaPredicted RBP11.48□□□□□ -0.57
PRPF18-202ENST00000378572 PPIAL4FP0DN26 164 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 HTR2CP28335 458 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
PRPF18-202ENST00000378572 PRSS12P56730 875 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 HES5Q5TA89 166 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 OR2T2Q6IF00 324 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 BTNL3Q6UXE8 466 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 PIGCQ92535 297 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 GPR173Q9NS66 373 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 SPATA2Q9UM82 520 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 SLC7A11Q9UPY5 501 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 ETV7Q9Y603 341 aa11.48□□□□□ -0.57
PRPF18-202ENST00000378572 CEACAM18A8MTB9 384 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 TRAPPC2LH3BP13 241 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 WIPF1O43516 503 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 CYB5R3P00387 301 aaPredicted RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 ETV6P41212 452 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 SRP9P49458 86 aaKnown RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 FUT6P51993 359 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 PRDX4Q13162 271 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 RAB11BQ15907 218 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 LHFPL2Q6ZUX7 228 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 LRRC28Q86X40 367 aaPredicted RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 ZDHHC23Q8IYP9 409 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 JAGN1Q8N5M9 183 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 ZNF671Q8TAW3 534 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 TRMT10AQ8TBZ6 339 aaKnown RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 S100ZQ8WXG8 99 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 DVL3Q92997 716 aaPredicted RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 PAPOLGQ9BWT3 736 aaKnown RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 SSBP3Q9BWW4 388 aaPredicted RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 SLC22A4Q9H015 551 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 ZMAT3Q9HA38 289 aaKnown RBP11.47□□□□□ -0.57
PRPF18-202ENST00000378572 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
PRPF18-202ENST00000378572 ADAM30Q9UKF2 790 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms