RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ADH4P08319 380 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 FAM209AQ5JX71 171 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ALKBH3Q96Q83 286 aaPredicted RBP10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ABHD1Q96SE0 405 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ICE1Q9Y2F5 2266 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 PRSS41Q7RTY9 318 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 OR1F12Q8NHA8 337 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ZG16BQ96DA0 208 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 MIXL1Q9H2W2 232 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 CNTD2Q9H8S5 307 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 IGHV1OR15-9A0A0B4J2B8 117 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 C3orf85A0A1B0GTC6 90 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF737O75373 536 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 LYZL6O75951 148 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF250P15622 560 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 RAG2P55895 527 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 C6orf201Q7Z4U5 140 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 C17orf78Q8N4C9 275 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ARRDC1Q8N5I2 433 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 MISP3Q96FF7 219 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 CYR61O00622 381 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 MPZL1O95297 269 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 CDKN2AP42771 156 aaKnown RBP10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 OR6S1Q8NH40 331 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 ACY3Q96HD9 319 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 FAM210BQ96KR6 192 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 F5H697 171 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 AP4M1O00189 453 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 TP53I13Q8NBR0 393 aaPredicted RBP10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 LRFN3Q9BTN0 628 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 MBD1Q9UIS9 605 aaPredicted RBP10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 TRBV23-1A0A0A0MS06 115 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 TRAV34A0A0B4J273 112 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 CEACAM6P40199 344 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 FAM53BQ14153 422 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 KISS1Q15726 138 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 C1QTNF12Q5T7M4 302 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 GPR137Q96N19 417 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 SIRT3Q9NTG7 399 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 WSB1Q9Y6I7 421 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 ADAMTSL1Q8N6G6 1762 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 J3QR89 54 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 DSCR4P56555 118 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 LGALSLQ3ZCW2 172 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 CLEC2AQ6UVW9 174 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 GOLT1BQ9Y3E0 138 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 GSTZ1O43708 216 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 ARG1P05089 322 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 MMP7P09237 267 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 SLC6A1P30531 599 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 CEACAM16Q2WEN9 425 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 OR5C1Q8NGR4 320 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 COMMD5Q9GZQ3 224 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 HDGFL3Q9Y3E1 203 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 CNN1P51911 297 aaKnown RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 INPP5JQ15735 1006 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 BHLHA9Q7RTU4 235 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 HSD17B13Q7Z5P4 300 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 NTNG2Q96CW9 530 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 OCIAD1Q9NX40 245 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 DCAF16Q9NXF7 216 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 LSM2Q9Y333 95 aaKnown RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 KIAA1324LA8MWY0 1029 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 AWAT1Q58HT5 328 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 LRRC10Q5BKY1 277 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF383Q8NA42 475 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 OR2V1Q8NHB1 315 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 ISOC2Q96AB3 205 aa10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 NOL4LQ96MY1 436 aaPredicted RBP10.66□□□□□ -0.7
PCDHA9-201ENST00000378122 CDC42EP2O14613 210 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 RER1O15258 196 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 NDUFB3O43676 98 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 SP9P0CG40 484 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 FUT7Q11130 342 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 CLN3Q13286 438 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 RPEL1Q2QD12 228 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 B3GNTL1Q67FW5 361 aaPredicted RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 PRSS54Q6PEW0 395 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 LINC01555Q8NAE3 123 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 UQCC1Q9NVA1 299 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 LAMB2P55268 1798 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 OR5AC1P0C628 307 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 ZBTB25P24278 435 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 MS4A10Q96PG2 267 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 LPAR3Q9UBY5 353 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF318Q5VUA4 2279 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 TRIP11Q15643 1979 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 LOC102723971A0A1B0GUV8 181 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 M1APQ8TC57 530 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 C19orf43Q9BQ61 176 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 FBXL17Q9UF56 701 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms