RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MYCBPQ99417 103 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-204ENST00000376643 NKX3-1Q99801 234 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-204ENST00000376643 NEK6Q9HC98 313 aa11.96□□□□□ -0.49
HDAC6-204ENST00000376643 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-204ENST00000376643 MRM2Q9UI43 246 aaKnown RBP11.96□□□□□ -0.49
HDAC6-204ENST00000376643 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
HDAC6-204ENST00000376643 A0A1B0GTI1 187 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 FAM230AA0A1W2PPH8 454 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 FUOMA2VDF0 154 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 PRR32B1ATL7 298 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 F2RL2O00254 374 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 IGHV1-8P0DP01 117 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 PIPP12273 146 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-204ENST00000376643 FASP25445 335 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 PEX2P28328 305 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 COL10A1Q03692 680 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF273Q14593 569 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 ATP6AP1Q15904 470 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 DMRTC1Q5HYR2 192 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF782Q6ZMW2 699 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-204ENST00000376643 PLEKHG7Q6ZR37 379 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 NDUFA11Q86Y39 141 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 C1QL4Q86Z23 238 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 Q8N2B8 174 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 C11orf42Q8N5U0 333 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 DNAAF1Q8NEP3 725 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 CAPSLQ8WWF8 208 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
HDAC6-204ENST00000376643 OSBPL10Q9BXB5 764 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 CHST5Q9GZS9 411 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 GABARAPL1Q9H0R8 117 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 PCDHGB5Q9Y5G0 923 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 LINC00312Q9Y6C7 94 aa11.95□□□□□ -0.5
HDAC6-204ENST00000376643 ODF3BA8MYP8 253 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 RPP14O95059 124 aaKnown RBP11.94□□□□□ -0.5
HDAC6-204ENST00000376643 HTR1FP30939 366 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-204ENST00000376643 EFNB1P98172 346 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
HDAC6-204ENST00000376643 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 KPRPQ5T749 579 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-204ENST00000376643 KDM4DQ6B0I6 523 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 C16orf82Q7Z2V1 217 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 CATSPERDQ86XM0 798 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 OR8J1Q8NGP2 316 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 TRMT10AQ8TBZ6 339 aaKnown RBP11.94□□□□□ -0.5
HDAC6-204ENST00000376643 IL4I1Q96RQ9 567 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 FAM53CQ9NYF3 392 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 FOXJ3Q9UPW0 622 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 SESN1Q9Y6P5 492 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 TGP01266 2768 aa11.94□□□□□ -0.5
HDAC6-204ENST00000376643 MEGF11A6BM72 1044 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 CHST1O43916 411 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF737O75373 536 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
HDAC6-204ENST00000376643 OCM2P0CE71 109 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 OCMP0CE72 109 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-204ENST00000376643 PRKACBP22694 351 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 RBP2P50120 134 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 ATP1B3P54709 279 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 DLX6P56179 175 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 CDC42P60953 191 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 SSX2Q16385 188 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 BEAN1Q3B7T3 259 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 SAMD5Q5TGI4 173 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 OR52W1Q6IF63 320 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 SLC25A26Q70HW3 274 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 ANGPTL5Q86XS5 388 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 EGFL6Q8IUX8 553 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 EMG1Q92979 244 aaKnown RBP11.93□□□□□ -0.5
HDAC6-204ENST00000376643 CREB3L1Q96BA8 519 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 MRPL48Q96GC5 212 aaKnown RBP11.93□□□□□ -0.5
HDAC6-204ENST00000376643 GAL3ST2Q9H3Q3 398 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF702PQ9H963 129 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 RHOFQ9HBH0 211 aa11.93□□□□□ -0.5
HDAC6-204ENST00000376643 TRBV2A0A0J9YWF9 115 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 A6NDX4 124 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 MGST3O14880 152 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 HAND1O96004 215 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 ERP29P30040 261 aaKnown RBP11.92□□□□□ -0.5
HDAC6-204ENST00000376643 ACTA2P62736 377 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 ACTG2P63267 376 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 ACTC1P68032 377 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 ACTA1P68133 377 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 GRK1Q15835 563 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 TMEM244Q5VVB8 128 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 LHFPL2Q6ZUX7 228 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 KCTD20Q7Z5Y7 419 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 LHFPL4Q7Z7J7 247 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 RTN4RL2Q86UN3 420 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF676Q8N7Q3 588 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 C11orf44Q8N8P7 122 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms