RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PP6455Q8WZ26 134 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 DCUN1D4Q92564 292 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 PIGTQ969N2 578 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 ARHGAP5-AS1Q96IT6 56 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 RNF126Q9BV68 326 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 HES7Q9BYE0 225 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 GPR179Q6PRD1 2367 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 RAD51DO75771 328 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 ZNF32P17041 273 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 OR2B8PP59922 312 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 CEACAM16Q2WEN9 425 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 KRBOX4Q5JUW0 171 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 DHRS13Q6UX07 377 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 DRAM2Q6UX65 266 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 DMRTC2Q8IXT2 367 aaPredicted RBP12.17□□□□□ -0.46
MSH5-202ENST00000375740 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 OR51T1Q8NGJ9 327 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 OR2AE1Q8NHA4 323 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 AKR7LQ8NHP1 331 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 AKR1E2Q96JD6 320 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 PFDN5Q99471 154 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 CHST5Q9GZS9 411 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 PLA2G3Q9NZ20 509 aa12.17□□□□□ -0.46
MSH5-202ENST00000375740 A0A1B0GV90 55 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 ZNF729A6NN14 1252 aaPredicted RBP12.16□□□□□ -0.46
MSH5-202ENST00000375740 C21orf140B9A014 251 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 CYTIPO60759 359 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 IFNA6P05013 189 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 CELA3AP09093 270 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 ACKR3P25106 362 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 EIF3IQ13347 325 aaKnown RBP12.16□□□□□ -0.46
MSH5-202ENST00000375740 RNF212Q495C1 297 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 C15orf54Q8N8G6 183 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
MSH5-202ENST00000375740 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 FGFBP3Q8TAT2 258 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 CPNE4Q96A23 557 aaPredicted RBP12.16□□□□□ -0.46
MSH5-202ENST00000375740 RHOVQ96L33 236 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 FOXB1Q99853 325 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 C20orf24Q9BUV8 137 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 MYO7BQ6PIF6 2116 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 A0A1W2PPH5 198 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 PPIHO43447 177 aaKnown RBP12.16□□□□□ -0.46
MSH5-202ENST00000375740 VAMP1P23763 118 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 ITGA3P26006 1051 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 LPAR6P43657 344 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 CAV2P51636 162 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 IL13RA1P78552 427 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 SRYQ05066 204 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 DCAF10Q5QP82 559 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 ZNF561Q8N587 486 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 FAM89BQ8N5H3 189 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 GPR35Q9HC97 309 aa12.16□□□□□ -0.46
MSH5-202ENST00000375740 C9orf170A2RU37 121 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 C5orf51A6NDU8 294 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 GPR37O15354 613 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 NME2P22392 152 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 ALDH3B1P43353 468 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 PSG4Q00888 419 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 FAM189A2Q15884 450 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 ADAM5Q6NVV9 412 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 LPCAT3Q6P1A2 487 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 PLXDC2Q6UX71 529 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 LINC00696Q6ZRV3 163 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 LYG2Q86SG7 212 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 SULF2Q8IWU5 870 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 SEMA6DQ8NFY4 1073 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 HAS2Q92819 552 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 C10orf35Q96D05 121 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 CHMP1AQ9HD42 196 aaPredicted RBP12.15□□□□□ -0.46
MSH5-202ENST00000375740 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 LPAR3Q9UBY5 353 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 IL17BQ9UHF5 180 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 FREM2Q5SZK8 3169 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 TEX13DA0A0J9YY54 714 aaPredicted RBP12.15□□□□□ -0.46
MSH5-202ENST00000375740 MFNGO00587 321 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 LCATP04180 440 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 SERPINA5P05154 406 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 CRHP06850 196 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 SNRNP70P08621 437 aaKnown RBP12.15□□□□□ -0.46
MSH5-202ENST00000375740 SERPINA2P20848 420 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 EIF2S3P41091 472 aaKnown RBP12.15□□□□□ -0.46
MSH5-202ENST00000375740 PRSS12P56730 875 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 ARFRP1Q13795 201 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 CLINT1Q14677 625 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 IL34Q6ZMJ4 242 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 ZDHHC22Q8N966 263 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 CCDC54Q8NEL0 328 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 ADAMTS17Q8TE56 1095 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 REEP6Q96HR9 211 aa12.15□□□□□ -0.46
MSH5-202ENST00000375740 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
MSH5-202ENST00000375740 CACFD1Q9UGQ2 172 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms