RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 A0A0G2JK05 382 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PPC1 479 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 ICAM2P13598 275 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 C15orf54Q8N8G6 183 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 OR6S1Q8NH40 331 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 LIN7CQ9NUP9 197 aaKnown RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PLA2G3Q9NZ20 509 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 LIPGQ9Y5X9 500 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 IGHV1OR15-9A0A0B4J2B8 117 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PLSCR5A0PG75 271 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 MPPED1O15442 326 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 DHHO43323 396 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 NPBWR1P48145 328 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 SCAND1P57086 179 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 IGSF11Q5DX21 431 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 AP1S3Q96PC3 154 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CABLES2Q9BTV7 478 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PPQ1 181 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 LMO7DNF2Z398 122 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 SH2D1BO14796 132 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 RAB1AP62820 205 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 COMMD1Q8N668 190 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PIAS2O75928 621 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 GALR1P47211 349 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 DHODHQ02127 395 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 MGAT2Q10469 447 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 UHRF2Q96PU4 802 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 CACNA1IQ9P0X4 2223 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 KIR2DS1A0A191URI9 304 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 PNPP00491 289 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 HPP00738 406 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 KIR2DS4P43632 304 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 KIR2DS1Q14954 304 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 NHLRC3Q5JS37 347 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 LYZL2Q7Z4W2 148 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 POM121Q96HA1 1249 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 UCN2Q96RP3 112 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 DUSP13Q9UII6 198 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 KCNK7Q9Y2U2 307 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ANAPC1Q9H1A4 1944 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 A0A1W2PP11 408 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 NCR3LG1Q68D85 454 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 LHFPL5Q8TAF8 219 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 GNPNAT1Q96EK6 184 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-202ENST00000375340 SEC11CQ9BY50 192 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 HEATR5BQ9P2D3 2071 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 KIAA1549LQ6ZVL6 1849 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 IGHEP01854 428 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 SLC25A4P12235 298 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 GNB1P62873 340 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF468Q5VIY5 522 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-202ENST00000375340 SLC35B3Q9H1N7 401 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 KIF26BQ2KJY2 2108 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 EPOPA6NHQ4 379 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 CDK2AP1O14519 115 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 S100A8P05109 93 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 CEACAM6P40199 344 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 GPR12P47775 334 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 C3AR1Q16581 482 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ANKRD55Q3KP44 614 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 OR5M9Q8NGP3 310 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 OR1K1Q8NGR3 316 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM68Q96MH6 324 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 RASL12Q9NYN1 266 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 HDGFL3Q9Y3E1 203 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 MASP2O00187 686 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 IGHV4-34P06331 123 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 CD200P41217 278 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 POLR2GP62487 172 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMC1A-202ENST00000375340 PRDX4Q13162 271 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 SHISA5Q8N114 240 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 SLC26A10Q8NG04 563 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 HEYLQ9NQ87 328 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-202ENST00000375340 OCIAD1Q9NX40 245 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 STARD10Q9Y365 291 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 IGHV3-43A0A0B4J1X8 118 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 CELA2AP08217 269 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 IGHV3-43DP0DP04 118 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF32P17041 273 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 CA6P23280 308 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ERVS71-1P61550 626 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 HLA-BQ31612 363 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 FFAR4Q5NUL3 377 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ARTNQ5T4W7 220 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 OR11L1Q8NGX0 322 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 OR2V1Q8NHB1 315 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 MVB12AQ96EY5 273 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ADGRG7Q96K78 797 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 TPPP3Q9BW30 176 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 MFRPQ9BY79 579 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 LAMP3Q9UQV4 416 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 LOXL2Q9Y4K0 774 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 TERTO14746 1132 aaKnown RBP5.77□□□□□ -1.49
SMC1A-202ENST00000375340 MT-ND4LP03901 98 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 ARR3P36575 388 aa5.77□□□□□ -1.49
SMC1A-202ENST00000375340 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-202ENST00000375340 AQP3Q92482 292 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms