RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
UBR4-203ENST00000375225 DECR2Q9NUI1 292 aa10.62□□□□□ -0.71
UBR4-203ENST00000375225 RIF1Q5UIP0 2472 aaKnown RBP10.62□□□□□ -0.71
UBR4-203ENST00000375225 FAM186AA6NE01 2351 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 C5orf63A6NC05 138 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 CRYM-AS1A6NIL9 109 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ZNF724A8MTY0 619 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 PDCD6O75340 191 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 RFPL3SP0C7P2 107 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ZNF728P0DKX0 622 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ACKR3P25106 362 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 CHATP28329 748 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ARR3P36575 388 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 UCP3P55916 312 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 SUPT4H1P63272 117 aaKnown RBP10.61□□□□□ -0.71
UBR4-203ENST00000375225 SRPXP78539 464 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 FAM3AP98173 230 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 PLGLB1Q02325 96 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
UBR4-203ENST00000375225 TGIF1Q15583 401 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 RSPO4Q2I0M5 234 aaPredicted RBP10.61□□□□□ -0.71
UBR4-203ENST00000375225 ANKRD55Q3KP44 614 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ELP2Q6IA86 826 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ZNF585AQ6P3V2 769 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 CRIP3Q6Q6R5 217 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 DHRS11Q6UWP2 260 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 MCEMP1Q8IX19 187 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 SLC38A6Q8IZM9 456 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 FAM185AQ8N0U4 392 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 PIGCQ92535 297 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 ZNF837Q96EG3 531 aaPredicted RBP10.61□□□□□ -0.71
UBR4-203ENST00000375225 ZNF75AQ96N20 296 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 SLC6A15Q9H2J7 730 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 PLEKHA2Q9HB19 425 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 AK3Q9UIJ7 227 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 AHCTF1Q8WYP5 2266 aa10.61□□□□□ -0.71
UBR4-203ENST00000375225 SFTPBP07988 381 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 FCGR3AP08637 254 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 HOXD4P09016 255 aaPredicted RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 FUT3P21217 361 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 S100A10P60903 97 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 HERV-K104P61576 105 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 PLP2Q04941 152 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 FOXO1Q12778 655 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 TAF9Q16594 264 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 SRSF7Q16629 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
UBR4-203ENST00000375225 IAH1Q2TAA2 248 aaPredicted RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 UNQ6126/PRO20091Q6UXV3 157 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 MRPL21Q7Z2W9 205 aaKnown RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 VASH2Q86V25 355 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 TMEM200AQ86VY9 491 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 SKA3Q8IX90 412 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 PSMF1Q92530 271 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 SAT2Q96F10 170 aaPredicted RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 HIST1H2AAQ96QV6 131 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 FAAP24Q9BTP7 215 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 RNF126Q9BV68 326 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 LDAHQ9H6V9 325 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 ZNF703Q9H7S9 590 aaPredicted RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 C12orf4Q9NQ89 552 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 DEPPQ9NTK1 212 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 GSKIPQ9P0R6 139 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 ST3GAL6Q9Y274 331 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 KLF13Q9Y2Y9 288 aaPredicted RBP10.6□□□□□ -0.71
UBR4-203ENST00000375225 GVINP1Q7Z2Y8 2422 aa10.6□□□□□ -0.71
UBR4-203ENST00000375225 FGF16O43320 207 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 SPRY1O43609 319 aaPredicted RBP10.59□□□□□ -0.71
UBR4-203ENST00000375225 ANGPTL7O43827 346 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 ADAP1O75689 374 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 SCO1O75880 301 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 HOXB5P09067 269 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 MMP7P09237 267 aaPredicted RBP10.59□□□□□ -0.71
UBR4-203ENST00000375225 RPS2P15880 293 aaKnown RBP10.59□□□□□ -0.71
UBR4-203ENST00000375225 PI3P19957 117 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 ANOS1P23352 680 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 RBM11P57052 281 aaKnown RBP10.59□□□□□ -0.71
UBR4-203ENST00000375225 ZNF92Q03936 586 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 TUSC1Q2TAM9 212 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 LINC00596Q86U02 117 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 RTN4RL2Q86UN3 420 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 MKXQ8IYA7 352 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 SPERTQ8NA61 448 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 OR51F2Q8NH61 342 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 ABHD3Q8WU67 409 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 NANOS1Q8WY41 292 aaKnown RBP10.59□□□□□ -0.71
UBR4-203ENST00000375225 MAFIPQ8WZ33 124 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 APOBEC3DQ96AK3 386 aaPredicted RBP10.59□□□□□ -0.71
UBR4-203ENST00000375225 GALNT14Q96FL9 552 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 CNTNAP3BQ96NU0 1288 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 CNTNAP3Q9BZ76 1288 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 NAA60Q9H7X0 242 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 GPR160Q9UJ42 338 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 TUBD1Q9UJT1 453 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 DOCK10Q96BY6 2186 aa10.59□□□□□ -0.71
UBR4-203ENST00000375225 ARGFXA6NJG6 315 aa10.58□□□□□ -0.72
UBR4-203ENST00000375225 ZNF891A8MT65 544 aaPredicted RBP10.58□□□□□ -0.72
UBR4-203ENST00000375225 KLRC4-KLRK1H3BQV0 150 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms