RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 RNF2Q99496 336 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 FOXJ3Q9UPW0 622 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 KNL1Q8NG31 2342 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 K7ESF4 209 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 MOGAT1Q96PD6 335 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 ASPDHA6ND91 283 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 CDKN2AP42771 156 aaKnown RBP13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 FLYWCH2Q96CP2 140 aaKnown RBP13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 IGHV1OR21-1A0A087WYE8 117 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 A0A1W2PPE3 182 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 MBP02144 154 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 ACSM4P0C7M7 580 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 TCL1AP56279 114 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 SYS1Q8N2H4 156 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 C4orf45Q96LM5 186 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 CACNG5Q9UF02 275 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 WASHC3Q9Y3C0 194 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 HRKO00198 91 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 EML2O95834 649 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 OR5AC1P0C628 307 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 OR2A2Q6IF42 318 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF441Q8N8Z8 693 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 GABRG3Q99928 467 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF385DQ9H6B1 395 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 TRBV5-4A0A0C4DH59 114 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 KLK8O60259 260 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 CYC1P08574 325 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 TRAPPC2P0DI81 140 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 TRAPPC2BP0DI82 140 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 CD200P41217 278 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 NHLH1Q02575 133 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 NHLH2Q02577 135 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 VWA1Q6PCB0 445 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 OR5C1Q8NGR4 320 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM174Q8WUU8 243 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 FGF11Q92914 225 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 LINC00615Q96LM1 132 aaPredicted RBP13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 BCL2L10Q9HD36 194 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 PTGFRP43088 359 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 GALR1P47211 349 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 PLEKHA2Q9HB19 425 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 SLC2A9Q9NRM0 540 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 BRWD1Q9NSI6 2320 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
NOTCH4-201ENST00000375023 BCL3P20749 454 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 ATP5J2P56134 94 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM140Q9NV12 185 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 OR5AL1P0C617 328 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 C1QL3Q5VWW1 255 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 OR5D13Q8NGL4 314 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 DCTN5Q9BTE1 182 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 C3orf85A0A1B0GTC6 90 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 BMI1P35226 326 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 CD96P40200 585 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 SLC38A11Q08AI6 406 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM229BQ8NBD8 167 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 NOL4LQ96MY1 436 aaPredicted RBP13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 NAT8BQ9UHF3 227 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF716A6NP11 495 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 CXCL10P02778 98 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 REG1BP48304 166 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 OR8B3Q8NGG8 313 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 OR8B2Q96RD0 313 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 N4BP2Q86UW6 1770 aaPredicted RBP13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 FAHD1Q6P587 224 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 BHLHA15Q7RTS1 189 aaPredicted RBP13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 MOGAT3Q86VF5 341 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 OR4A4PQ8NGN8 299 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 PPP1R1AQ13522 171 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 LY6DQ14210 128 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 MMP24Q9Y5R2 645 aa13.06□□□□□ -0.32
NOTCH4-201ENST00000375023 A0A0B4J2E0 115 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 A0A1B0GX12 115 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 FZD6O60353 706 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 SMPD2O60906 423 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 HSBP1O75506 76 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 HIST1H3AP68431 136 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 TPBGQ13641 420 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 HIKESHIQ53FT3 197 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 LILRB1Q8NHL6 650 aaPredicted RBP13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 TMEM56Q96MV1 263 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 MYO5AQ9Y4I1 1855 aaKnown RBP13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 LILRA5A6NI73 299 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 BCL2L11O43521 198 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 FOXO1Q12778 655 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 SSPNQ14714 243 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 ETV3LQ6ZN32 361 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 SIGLEC7Q9Y286 467 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 AANATQ16613 207 aa13.05□□□□□ -0.32
NOTCH4-201ENST00000375023 PJVKQ0ZLH3 352 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms