RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OR3A3P47888 321 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PER3P56645 1201 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FGF12P61328 243 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PPP1CBP62140 327 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 DHODHQ02127 395 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 DAZAP2Q15038 168 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OVCH2Q7RTZ1 564 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 LYG2Q86SG7 212 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PEG10Q86TG7 708 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SPACA3Q8IXA5 215 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 RADILQ96JH8 1075 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SULT4A1Q9BR01 284 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FAAP24Q9BTP7 215 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF629Q9UEG4 869 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF230Q9UIE0 474 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 NOP16Q9Y3C1 178 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ANKRD11Q6UB99 2663 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 A0A1W2PR80 420 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GSTT2P0CG29 244 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FPR2P25090 351 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GNG3P63215 75 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 C2orf68Q2NKX9 166 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 CHRFAM7AQ494W8 412 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 C1orf185Q5T7R7 199 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 C17orf107Q6ZR85 190 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 NAXEQ8NCW5 288 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SCGB3A2Q96PL1 93 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 CMSS1Q9BQ75 279 aaKnown RBP15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 CHIAQ9BZP6 476 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PPA2Q9H2U2 334 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF71Q9NQZ8 489 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF701Q9NV72 531 aaPredicted RBP15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF581Q9P0T4 197 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OSGIN2Q9Y236 505 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FAM215AQ9Y5M1 114 aa15.43■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GOSR2O14653 212 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 LILRA1O75019 489 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 RGS11O94810 467 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HLA-AP01891 365 aaKnown RBP15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 BCL3P20749 454 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FUT3P21217 361 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 NPBWR2P48146 333 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 H2BFSP57053 126 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TSPAN5P62079 268 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GRK1Q15835 563 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OR2T2Q6IF00 324 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF573Q86YE8 665 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF610Q8N9Z0 462 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 BHLHE23Q8NDY6 225 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OR13G1Q8NGZ3 307 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MARCH1Q8TCQ1 289 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SLAMF9Q96A28 289 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HDHD3Q9BSH5 251 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TMPRSS13Q9BYE2 586 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PKIBQ9C010 78 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OR51B6Q9H340 312 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 EHFQ9NZC4 300 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OPN4Q9UHM6 478 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GPR132Q9UNW8 380 aa15.42■□□□□ 0.06
HLA-DQB1-201ENST00000374943 F5H5P2 479 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SNAPC5O75971 98 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TOXO94900 526 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FCGR3AP08637 254 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 RAC2P15153 192 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TIMP3P35625 211 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PPP1R1AQ13522 171 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SURF2Q15527 256 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TSC22D1Q15714 1073 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF324BQ6AW86 544 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 LPCAT3Q6P1A2 487 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 BEND4Q6ZU67 534 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 CXorf67Q86X51 503 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FAM169BQ8N8A8 192 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TMEM185AQ8NFB2 350 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OPN3Q9H1Y3 402 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ANXA10Q9UJ72 324 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ACACAQ13085 2346 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 IGKV1D-8A0A087WSZ0 117 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 C9orf170A2RU37 121 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TRAPPC2LH3BP13 241 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SLC22A5O76082 557 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 IGLV1-44P01699 117 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HOXD4P09016 255 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SELEP16581 610 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HLA-GP17693 338 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TUBG1P23258 451 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 CD34P28906 385 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ECI1P42126 302 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 UCP2P55851 309 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 IL24Q13007 206 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 NDUFA5Q16718 116 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MPV17LQ2QL34 196 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SPATA46Q5T0L3 261 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 AADACL3Q5VUY0 350 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FAM180AQ6UWF9 173 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 LINC00596Q86U02 117 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MITD1Q8WV92 249 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MAFIPQ8WZ33 124 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OR2J1Q9GZK6 312 aa15.41■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PLK3Q9H4B4 646 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms