RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MAP2K3P46734 347 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CLDN20P56880 219 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 GNG5P63218 68 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 KIR2DS5Q14953 304 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 POM121L1PQ3SYA9 428 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 TIGITQ495A1 244 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 ARTNQ5T4W7 220 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 ZNF684Q5T5D7 378 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 HIST2H3AQ71DI3 136 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CLEC14AQ86T13 490 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 OR4F6Q8NGB9 312 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 OR13C6PQ8NH95 151 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 PYCR2Q96C36 320 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 MRPL53Q96EL3 112 aaKnown RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 SEC22AQ96IW7 307 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 A4GALTQ9NPC4 353 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 TMEM45AQ9NWC5 275 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 KLK11Q9UBX7 282 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CD207Q9UJ71 328 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 RAXQ9Y2V3 346 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 TIMM13Q9Y5L4 95 aaPredicted RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 A0A1W2PPI3 338 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 A0A1W2PPV9 198 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 TMEM129A0AVI4 362 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CD160O95971 181 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 SEMG1P04279 462 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 ADH5P11766 374 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CD52P31358 61 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 POLR2HP52434 150 aaKnown RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 FOXG1P55316 489 aaPredicted RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 RPS27AP62979 156 aaKnown RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 UBA52P62987 128 aaKnown RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 TIMM50Q3ZCQ8 353 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 D2HGDHQ8N465 521 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 ARHGEF39Q8N4T4 335 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 METTL27Q8N6F8 245 aaPredicted RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 OR2T12Q8NG77 320 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 OR4L1Q8NH43 312 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 ZNF418Q8TF45 676 aaPredicted RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 ZNF576Q9H609 170 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CA10Q9NS85 328 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 LOC100509620A0A075B734 347 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 SLC22A20A6NK97 555 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 AOC1P19801 751 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 RPL12P30050 165 aaKnown RBP6.9□□□□□ -1.31
USP48-203ENST00000374732 PLA2G5P39877 138 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 APOBEC1P41238 236 aaKnown RBP6.9□□□□□ -1.31
USP48-203ENST00000374732 CDKN2AP42771 156 aaKnown RBP6.9□□□□□ -1.31
USP48-203ENST00000374732 GLRBP48167 497 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 EIF5AP63241 154 aaKnown RBP6.9□□□□□ -1.31
USP48-203ENST00000374732 SELENOWP63302 87 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 CRADDP78560 199 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 FAM162BQ5T6X4 162 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 SLC25A47Q6Q0C1 308 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 ADAMTSL5Q6ZMM2 481 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 Q6ZSR3 168 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 OAFQ86UD1 273 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 TP53INP2Q8IXH6 220 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 CHST4Q8NCG5 386 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 OR1B1Q8NGR6 318 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 OR2T35Q8NGX2 323 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 ASB13Q8WXK3 278 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 UPRTQ96BW1 309 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 DNAJC30Q96LL9 226 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 SLC25A31Q9H0C2 315 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 NAT8Q9UHE5 227 aa6.9□□□□□ -1.31
USP48-203ENST00000374732 FAM95CA0A1B0GW59 222 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 M0R2Z0 102 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 SLC31A1O15431 190 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 NPY1RP25929 384 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 PIGFQ07326 219 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 PRSS8Q16651 343 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 TCTN1Q2MV58 587 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 CRB2Q5IJ48 1285 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 EIF5AL1Q6IS14 154 aaKnown RBP6.89□□□□□ -1.31
USP48-203ENST00000374732 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
USP48-203ENST00000374732 GALNT16Q8N428 558 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 OR6N2Q8NGY6 317 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 OXGR1Q96P68 337 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 TUBA4BQ9H853 241 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 KIAA1456Q9P272 454 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 TBX21Q9UL17 535 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 SCML2Q9UQR0 700 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 PRSS46E5RG02 174 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 CHST1O43916 411 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 FGF17O60258 216 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BKO60814 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BJP06899 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 OR5AC1P0C628 307 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 LIMS3P0CW19 117 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 LIMS4P0CW20 117 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 PRKACGP22612 351 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BOP23527 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 TNFSF8P32971 234 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BBP33778 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 TNFRSF4P43489 277 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BDP58876 126 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms