RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MAML2Q8IZL2 1156 aaPredicted RBP11.32□□□□□ -0.6
PRPF4-201ENST00000374198 OR2AJ1Q8NGZ0 328 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 C22orf15Q8WYQ4 148 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 BOD1Q96IK1 185 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 VSTM2LQ96N03 204 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 OR2A5Q96R48 311 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 NAGKQ9UJ70 344 aa11.32□□□□□ -0.6
PRPF4-201ENST00000374198 MRPS2Q9Y399 296 aaKnown RBP11.32□□□□□ -0.6
PRPF4-201ENST00000374198 A0A1W2PP11 408 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 FAM221AA4D161 298 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 HBE1P02100 147 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 DBHP09172 617 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 OR10J1P30954 320 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 GALNSP34059 522 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 SFTPDP35247 375 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 VAMP2P63027 116 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 SP6Q3SY56 376 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 FBXW12Q6X9E4 464 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 TMEM170AQ8WVE7 144 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 REEP6Q96HR9 211 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF2Q9BSG1 426 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-201ENST00000374198 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 CALHM2Q9HA72 323 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 PILRAQ9UKJ1 303 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 B4E171 279 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
PRPF4-201ENST00000374198 CD55P08174 381 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
PRPF4-201ENST00000374198 ACKR1Q16570 336 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 WDR25Q64LD2 544 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-201ENST00000374198 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF519Q8TB69 540 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 TSLPQ969D9 159 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 VN1R1Q9GZP7 353 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 OR51B6Q9H340 312 aa11.31□□□□□ -0.6
PRPF4-201ENST00000374198 VCANP13611 3396 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 C2CD4DB7Z1M9 353 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 ITGB1BP1O14713 200 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 H2BFMP0C1H6 154 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 MMP9P14780 707 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 DUSP1P28562 367 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 TMEM187Q14656 261 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 RNASE8Q8TDE3 154 aaKnown RBP11.3□□□□□ -0.6
PRPF4-201ENST00000374198 FOXQ1Q9C009 403 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 HIPK2Q9H2X6 1198 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 DNAJC4Q9NNZ3 241 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 LAMP3Q9UQV4 416 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 SLC35E2P0CK97 266 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 OR3A4PP47883 348 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 GNMTQ14749 295 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 NUP54Q7Z3B4 507 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 TMEM123Q8N131 208 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 GBGT1Q8N5D6 347 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 CPEB3Q8NE35 698 aaKnown RBP11.3□□□□□ -0.6
PRPF4-201ENST00000374198 DAZLQ92904 295 aaKnown RBP11.3□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF524Q96C55 264 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 OR2J1Q9GZK6 312 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 SLC7A11Q9UPY5 501 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 ZFP30Q9Y2G7 519 aa11.3□□□□□ -0.6
PRPF4-201ENST00000374198 COA3Q9Y2R0 106 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF878C9JN71 531 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 HRKO00198 91 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 PITX3O75364 302 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 TTRP02766 147 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 CTHP32929 405 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 PIGPP57054 158 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 FAM189A2Q15884 450 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 CBLN3Q6UW01 205 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 RTL10Q7L3V2 364 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
PRPF4-201ENST00000374198 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 BCORP1Q8N888 145 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 TMEM37Q8WXS4 190 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 HCFC1R1Q9NWW0 138 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 C2orf16Q68DN1 1984 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 FAM24AA6NFZ4 105 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 IGLON5A6NGN9 336 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF732B4DXR9 585 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 IFNL4K9M1U5 179 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 LCATP04180 440 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 TNFSF10P50591 281 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 CD226Q15762 336 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 LINC00346Q8IVM7 164 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
PRPF4-201ENST00000374198 C18orf12Q96KH6 178 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 TPSD1Q9BZJ3 242 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 PCED1AQ9H1Q7 454 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 OR10A2Q9H208 303 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 DECR2Q9NUI1 292 aa11.29□□□□□ -0.6
PRPF4-201ENST00000374198 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 PLRG1O43660 514 aaKnown RBP11.28□□□□□ -0.6
PRPF4-201ENST00000374198 ZNF823P16415 610 aa11.28□□□□□ -0.6
PRPF4-201ENST00000374198 GZMHP20718 246 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms