RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TCTN1Q2MV58 587 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 NCMAPQ5T1S8 102 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 RSRP1Q9BUV0 290 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 UBE2ZQ9H832 354 aaPredicted RBP12.66□□□□□ -0.38
LMX1B-202ENST00000373474 UBR3Q6ZT12 1888 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 PLPP3O14495 311 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 NHLRC1Q6VVB1 395 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 ETV3LQ6ZN32 361 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 LINC00052Q96N35 136 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 FOXB1Q99853 325 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 THSD7AQ9UPZ6 1657 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 HLA-DRB5Q30154 266 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 FAM78BQ5VT40 261 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 WDR74Q6RFH5 385 aaPredicted RBP12.66□□□□□ -0.38
LMX1B-202ENST00000373474 TMEM251Q8N6I4 163 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 VN1R1Q9GZP7 353 aa12.66□□□□□ -0.38
LMX1B-202ENST00000373474 LINC00862A6NCI5 91 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 TCF21O43680 179 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 NEURL1O76050 574 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
LMX1B-202ENST00000373474 FAM157BP0CG42 384 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 FUT3P21217 361 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 SELENOPP49908 381 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 KISS1Q15726 138 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
LMX1B-202ENST00000373474 MEGF10Q96KG7 1140 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 B2MP61769 119 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ANKRD37Q7Z713 158 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 OR5AU1Q8NGC0 362 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 APOBEC3DQ96AK3 386 aaPredicted RBP12.65□□□□□ -0.38
LMX1B-202ENST00000373474 LRFN3Q9BTN0 628 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ADAT1Q9BUB4 502 aaKnown RBP12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
LMX1B-202ENST00000373474 PITPNC1Q9UKF7 332 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 PROCRQ9UNN8 238 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 OR2T8A6NH00 312 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 DHRS3O75911 302 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ZBTB25P24278 435 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 C19orf57Q0VDD7 668 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 OR5D13Q8NGL4 314 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 MCHR2Q969V1 340 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 TMEM230Q96A57 120 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
LMX1B-202ENST00000373474 A0A1B0GTH9 108 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 RBFOX3A6NFN3 312 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 CST7O76096 145 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 GP1BAP07359 652 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 INHBBP09529 407 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ATP6V1FQ16864 119 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 CEACAM16Q2WEN9 425 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 AWAT1Q58HT5 328 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 OR1L3Q8NH93 324 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 IL17BQ9UHF5 180 aa12.65□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF98A6NK75 572 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 S100A4P26447 101 aaKnown RBP12.64□□□□□ -0.39
LMX1B-202ENST00000373474 PTGFRP43088 359 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 DMRTC1Q5HYR2 192 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 RPS16P62249 146 aaKnown RBP12.64□□□□□ -0.39
LMX1B-202ENST00000373474 CA5BP1Q8WTZ4 195 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 MRM2Q9UI43 246 aaKnown RBP12.64□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF391Q9UJN7 358 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 LY75O60449 1722 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 C10orf111Q8N326 155 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 ADPRHL1Q8NDY3 354 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 STARD4Q96DR4 205 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 ZPBPQ9BS86 351 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 FOXQ1Q9C009 403 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 MPC2O95563 127 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 OR3A4PP47883 348 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 BSXQ3C1V8 233 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 Q7L0L9 218 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 ELOVL1Q9BW60 279 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 CNTD2Q9H8S5 307 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.64□□□□□ -0.39
LMX1B-202ENST00000373474 SLC38A11Q08AI6 406 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 INPP5JQ15735 1006 aaPredicted RBP12.64□□□□□ -0.39
LMX1B-202ENST00000373474 GALMQ96C23 342 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
LMX1B-202ENST00000373474 IGHV5-51A0A0C4DH38 117 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 MYF5P13349 255 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 DRD3P35462 400 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 DUSP2Q05923 314 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 TRIP11Q15643 1979 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 LNP1A1A4G5 178 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 HYAL3O43820 417 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-202ENST00000373474 HEXAP06865 529 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 SUCLG1P53597 346 aaKnown RBP12.63□□□□□ -0.39
LMX1B-202ENST00000373474 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-202ENST00000373474 RASL12Q9NYN1 266 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 IGHV3-64DA0A0J9YX35 117 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 SLC22A20A6NK97 555 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 LINC01387J3KSC0 135 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms